BLASTX nr result

ID: Coptis21_contig00039867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039867
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568728.1| PREDICTED: coiled-coil domain-containing pro...    64   2e-08
ref|XP_002309559.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
emb|CAN72066.1| hypothetical protein VITISV_042589 [Vitis vinifera]    62   5e-08
gb|AFW82085.1| hypothetical protein ZEAMMB73_801243 [Zea mays]         61   8e-08
gb|AFW82084.1| hypothetical protein ZEAMMB73_801243 [Zea mays]         61   8e-08

>ref|XP_003568728.1| PREDICTED: coiled-coil domain-containing protein 25-like
           [Brachypodium distachyon]
          Length = 215

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -3

Query: 363 GNYTIFMGLDKHENEDLIKYGFPEDIWY 280
           G+YTIFMGLDKHENEDLIKYGFPEDIW+
Sbjct: 12  GDYTIFMGLDKHENEDLIKYGFPEDIWF 39


>ref|XP_002309559.1| predicted protein [Populus trichocarpa] gi|222855535|gb|EEE93082.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -3

Query: 363 GNYTIFMGLDKHENEDLIKYGFPEDIWY 280
           G+YTIFMGLDKHENE+LIKYGFPEDIW+
Sbjct: 12  GDYTIFMGLDKHENEELIKYGFPEDIWF 39


>emb|CAN72066.1| hypothetical protein VITISV_042589 [Vitis vinifera]
          Length = 199

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -3

Query: 363 GNYTIFMGLDKHENEDLIKYGFPEDIWY 280
           G+YTIFMGLDKHENE+LIKYGFPEDIW+
Sbjct: 12  GDYTIFMGLDKHENEELIKYGFPEDIWF 39


>gb|AFW82085.1| hypothetical protein ZEAMMB73_801243 [Zea mays]
          Length = 196

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -3

Query: 363 GNYTIFMGLDKHENEDLIKYGFPEDIWY 280
           G+YTIFMGLDK+ENEDLIKYGFPEDIW+
Sbjct: 12  GDYTIFMGLDKYENEDLIKYGFPEDIWF 39


>gb|AFW82084.1| hypothetical protein ZEAMMB73_801243 [Zea mays]
          Length = 180

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -3

Query: 363 GNYTIFMGLDKHENEDLIKYGFPEDIWY 280
           G+YTIFMGLDK+ENEDLIKYGFPEDIW+
Sbjct: 12  GDYTIFMGLDKYENEDLIKYGFPEDIWF 39


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