BLASTX nr result
ID: Coptis21_contig00039864
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039864 (237 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004146012.1| PREDICTED: peregrin-like [Cucumis sativus] g... 51 3e-08 ref|XP_003546630.1| PREDICTED: PHD finger protein rhinoceros-lik... 47 4e-07 ref|XP_003545699.1| PREDICTED: protein Jade-3-like [Glycine max] 47 4e-07 ref|XP_002331305.1| predicted protein [Populus trichocarpa] gi|2... 47 6e-07 ref|NP_974313.1| RING/FYVE/PHD zinc finger-containing protein [A... 44 4e-06 >ref|XP_004146012.1| PREDICTED: peregrin-like [Cucumis sativus] gi|449525830|ref|XP_004169919.1| PREDICTED: peregrin-like [Cucumis sativus] Length = 335 Score = 50.8 bits (120), Expect(2) = 3e-08 Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 15/79 (18%) Frame = +1 Query: 19 LDLNLEYQQSPEKETPIPSS---------------ISQKEFELFSIVKXXXXXXXXXGIL 153 LDLN+EY+ P +E I S +S E E+ I + GIL Sbjct: 79 LDLNVEYKPHPLEEESISKSELEGEKKEEEDKEKEVSDVEMEIQEI-ETVQDEEEDDGIL 137 Query: 154 CGVCQSTDGDPSDPIIAMD 210 C +CQSTDGDPSDPI+ D Sbjct: 138 CAICQSTDGDPSDPIVFCD 156 Score = 32.0 bits (71), Expect(2) = 3e-08 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +3 Query: 198 YCDGCDLMVHAIC 236 +CDGCDLMVHA C Sbjct: 154 FCDGCDLMVHASC 166 >ref|XP_003546630.1| PREDICTED: PHD finger protein rhinoceros-like [Glycine max] Length = 317 Score = 47.0 bits (110), Expect(2) = 4e-07 Identities = 25/63 (39%), Positives = 31/63 (49%) Frame = +1 Query: 22 DLNLEYQQSPEKETPIPSSISQKEFELFSIVKXXXXXXXXXGILCGVCQSTDGDPSDPII 201 DLN+EY SP + S+ E G+LC VCQSTDGDP+DPI+ Sbjct: 90 DLNVEYTPSPNNHGDLEEDHSEDE----------------DGVLCCVCQSTDGDPADPIV 133 Query: 202 AMD 210 D Sbjct: 134 FCD 136 Score = 32.0 bits (71), Expect(2) = 4e-07 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +3 Query: 198 YCDGCDLMVHAIC 236 +CDGCDLMVHA C Sbjct: 134 FCDGCDLMVHASC 146 >ref|XP_003545699.1| PREDICTED: protein Jade-3-like [Glycine max] Length = 317 Score = 47.0 bits (110), Expect(2) = 4e-07 Identities = 25/63 (39%), Positives = 31/63 (49%) Frame = +1 Query: 22 DLNLEYQQSPEKETPIPSSISQKEFELFSIVKXXXXXXXXXGILCGVCQSTDGDPSDPII 201 DLN+EY SP + S+ E G+LC VCQSTDGDP+DPI+ Sbjct: 90 DLNVEYTPSPNNHGDLEEDHSEDE----------------DGVLCCVCQSTDGDPADPIV 133 Query: 202 AMD 210 D Sbjct: 134 FCD 136 Score = 32.0 bits (71), Expect(2) = 4e-07 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +3 Query: 198 YCDGCDLMVHAIC 236 +CDGCDLMVHA C Sbjct: 134 FCDGCDLMVHASC 146 >ref|XP_002331305.1| predicted protein [Populus trichocarpa] gi|222873888|gb|EEF11019.1| predicted protein [Populus trichocarpa] Length = 329 Score = 47.4 bits (111), Expect(2) = 6e-07 Identities = 23/64 (35%), Positives = 32/64 (50%) Frame = +1 Query: 19 LDLNLEYQQSPEKETPIPSSISQKEFELFSIVKXXXXXXXXXGILCGVCQSTDGDPSDPI 198 +DLN+EY S +E + + + GILC +CQSTDGDP+DPI Sbjct: 86 IDLNVEYIPSSNEEIKADEENKKTPLPIINKSIDKYKEEEDDGILCAICQSTDGDPTDPI 145 Query: 199 IAMD 210 + D Sbjct: 146 VFCD 149 Score = 30.8 bits (68), Expect(2) = 6e-07 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +3 Query: 198 YCDGCDLMVHAIC 236 +CDGCDLMVH C Sbjct: 147 FCDGCDLMVHTTC 159 >ref|NP_974313.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gi|9294395|dbj|BAB02405.1| unnamed protein product [Arabidopsis thaliana] gi|225898643|dbj|BAH30452.1| hypothetical protein [Arabidopsis thaliana] gi|332642041|gb|AEE75562.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] Length = 343 Score = 43.5 bits (101), Expect(2) = 4e-06 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 6/76 (7%) Frame = +1 Query: 1 KKPSLRLDLNLEYQQSPEKETPIPSS------ISQKEFELFSIVKXXXXXXXXXGILCGV 162 KK +L ++ +LE ++ +KE P +S +E E GI+C V Sbjct: 108 KKSTLNVESSLEVEEDDDKENIDPLGKGKALDLSDREVE------------DEDGIMCAV 155 Query: 163 CQSTDGDPSDPIIAMD 210 CQSTDGDP +PI+ D Sbjct: 156 CQSTDGDPLNPIVFCD 171 Score = 32.0 bits (71), Expect(2) = 4e-06 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +3 Query: 198 YCDGCDLMVHAIC 236 +CDGCDLMVHA C Sbjct: 169 FCDGCDLMVHASC 181