BLASTX nr result

ID: Coptis21_contig00039859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039859
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529040.1| Chromosome-associated kinesin KIF4A, putativ...    55   5e-06

>ref|XP_002529040.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
            gi|223531520|gb|EEF33351.1| Chromosome-associated kinesin
            KIF4A, putative [Ricinus communis]
          Length = 1183

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
 Frame = +3

Query: 3    AIKPGQAVNQTDASVQTVSPKQTLIDAPATYSICTTCKQSI-NELDEVNGSLNMYNVTFA 179
            A+KP   V++  AS+Q ++      D  + Y +C +CKQ I N+ DEV  SL  + +T  
Sbjct: 710  ALKPCAEVDRAYASIQKLAEDAPSSDGSSAYVLCASCKQKINNKSDEVQDSLKTWTLTVD 769

Query: 180  GPRSLEALKGKTHKDGEKDSDEALKIE-KLEKLCAEQEAKIE 302
               +   L  +  KD +    EA + E +LE +C EQ A+IE
Sbjct: 770  EAGNSSKLTDQAAKDEDNGLKEAHRKENELENVCKEQAARIE 811