BLASTX nr result

ID: Coptis21_contig00039848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039848
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002456059.1| hypothetical protein SORBIDRAFT_03g029650 [S...    60   2e-07
emb|CBI30663.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002267261.1| PREDICTED: GDSL esterase/lipase At1g28580 [V...    56   3e-06

>ref|XP_002456059.1| hypothetical protein SORBIDRAFT_03g029650 [Sorghum bicolor]
           gi|241928034|gb|EES01179.1| hypothetical protein
           SORBIDRAFT_03g029650 [Sorghum bicolor]
          Length = 391

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
 Frame = +3

Query: 42  PATLVTIFLLLFLHIYG------VLGCYTSIFSFGDSLADTGNFIYSVEDKHS-YNNLPY 200
           PATL   + LL L + G      + GCYT IFSFGDSL DTGN+++     HS Y   PY
Sbjct: 18  PATLAAWWSLLLLAVIGSSGSPVLAGCYTRIFSFGDSLTDTGNYVHLTATSHSPYGAPPY 77

Query: 201 GETF 212
           G TF
Sbjct: 78  GRTF 81


>emb|CBI30663.3| unnamed protein product [Vitis vinifera]
          Length = 1124

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +3

Query: 60  IFLLLFLHIYGVLGCYTSIFSFGDSLADTGNFIYS--VEDKHSYNNLPYGETF 212
           I +L+F H   V+GCY SIFSFGDSL DTGN + +    +   +   PYGETF
Sbjct: 6   ILVLIFAHTQQVIGCYESIFSFGDSLTDTGNLLLASPAHNLPHFAKPPYGETF 58


>ref|XP_002267261.1| PREDICTED: GDSL esterase/lipase At1g28580 [Vitis vinifera]
          Length = 375

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +3

Query: 60  IFLLLFLHIYGVLGCYTSIFSFGDSLADTGNFIYS--VEDKHSYNNLPYGETF 212
           I +L+F H   V+GCY SIFSFGDSL DTGN + +    +   +   PYGETF
Sbjct: 6   ILVLIFAHTQQVIGCYESIFSFGDSLTDTGNLLLASPAHNLPHFAKPPYGETF 58


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