BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039835
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat...    91   7e-17
emb|CBI29893.3| unnamed protein product [Vitis vinifera]               91   7e-17
gb|ABR17838.1| unknown [Picea sitchensis]                              89   3e-16
ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat...    89   4e-16
ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    87   1e-15

>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/114 (42%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
 Frame = +2

Query: 50  AYQLFEQVPHRNKDTTLWTSIISAFNKSGNSYNAIQLFSQMLHQ-TKPNHFIYATVVRAC 226
           A ++ +++P RN     WT++IS +++ G +  A+ LF +ML   T PN F +ATV+ +C
Sbjct: 531 ARRVLDEMPERN--VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSC 588

Query: 227 ATSAAYLQLGKTIHSLVIKTGYLPNVVVETSLLDMYAKWGLVQFSRILFDEMPE 388
            +S+ + QLG+ IHSLVIKT +  ++ V +SLLDMYAK G +  +R +FD +PE
Sbjct: 589 TSSSGF-QLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE 641



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
 Frame = +2

Query: 50  AYQLFEQVPHRNKDTTLWTSIISAFNKSGNSYNAIQLFSQMLHQ-TKPNHFIYATVVRAC 226
           A ++F+ +P R  D    T+IIS + + G    A+ LF ++  +  + N+  YA+V+ A 
Sbjct: 632 ARRVFDGLPER--DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTAL 689

Query: 227 ATSAAYLQLGKTIHSLVIKTGYLPNVVVETSLLDMYAKWGLVQFSRILFDEMPE 388
           +  AA L  G+ +HS V++      VV++ SL+DMY+K G + +SR +FD MPE
Sbjct: 690 SGLAA-LDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPE 742


>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/114 (42%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
 Frame = +2

Query: 50  AYQLFEQVPHRNKDTTLWTSIISAFNKSGNSYNAIQLFSQMLHQ-TKPNHFIYATVVRAC 226
           A ++ +++P RN     WT++IS +++ G +  A+ LF +ML   T PN F +ATV+ +C
Sbjct: 64  ARRVLDEMPERN--VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSC 121

Query: 227 ATSAAYLQLGKTIHSLVIKTGYLPNVVVETSLLDMYAKWGLVQFSRILFDEMPE 388
            +S+ + QLG+ IHSLVIKT +  ++ V +SLLDMYAK G +  +R +FD +PE
Sbjct: 122 TSSSGF-QLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE 174



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
 Frame = +2

Query: 50  AYQLFEQVPHRNKDTTLWTSIISAFNKSGNSYNAIQLFSQMLHQ-TKPNHFIYATVVRAC 226
           A ++F+ +P R  D    T+IIS + + G    A+ LF ++  +  + N+  YA+V+ A 
Sbjct: 165 ARRVFDGLPER--DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTAL 222

Query: 227 ATSAAYLQLGKTIHSLVIKTGYLPNVVVETSLLDMYAKWGLVQFSRILFDEMPE 388
           +  AA L  G+ +HS V++      VV++ SL+DMY+K G + +SR +FD MPE
Sbjct: 223 SGLAA-LDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPE 275


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 53/129 (41%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
 Frame = +2

Query: 8   NAYVNSQVQ-NSLTYAYQLFEQVPHRNKDTTLWTSIISAFNKSGNSYNAIQLFSQMLHQ- 181
           NA VN   +  ++  AY+LFE++P +N     W +IIS +++ G+ + A+ LF +M  Q 
Sbjct: 361 NALVNMYAKCGNVNSAYKLFERMPKKN--VVAWNAIISGYSQHGHPHEALALFIEMQAQG 418

Query: 182 TKPNHFIYATVVRACATSAAYLQLGKTIHSLVIKTGYLPNVVVETSLLDMYAKWGLVQFS 361
            KP+ F   +V+ ACA   A L+ GK IH   I++G+  NVVV T L+D+YAK G V  +
Sbjct: 419 IKPDSFAIVSVLPACAHFLA-LEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTA 477

Query: 362 RILFDEMPE 388
           + LF+ MPE
Sbjct: 478 QKLFERMPE 486



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/117 (38%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
 Frame = +2

Query: 38  SLTYAYQLFEQVPHRNKDTTLWTSIISAFNKSGNSYNAIQLFSQM-LHQTKPNHFIYATV 214
           SL  A Q+F+++P R  D   W +II+ ++++G  Y A+ LFS+M ++  KPN     +V
Sbjct: 170 SLENARQVFDRMPKR--DVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSV 227

Query: 215 VRACATSAAYLQLGKTIHSLVIKTGYLPNVVVETSLLDMYAKWGLVQFSRILFDEMP 385
           +  CA   A L+ GK IH   I++G   +V+V   L++MYAK G V  +  LF+ MP
Sbjct: 228 MPVCAHLLA-LEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMP 283



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
 Frame = +2

Query: 5   LNAYVNSQVQ-NSLTYAYQLFEQVPHRNKDTTLWTSIISAFNKSGNSYNAIQLFSQM-LH 178
           +N  VN   +  ++  A++LFE++P R  D   W +II  ++ +   + A+  F++M + 
Sbjct: 259 VNGLVNMYAKCGNVNTAHKLFERMPIR--DVASWNAIIGGYSLNSQHHEALAFFNRMQVR 316

Query: 179 QTKPNHFIYATVVRACATSAAYLQLGKTIHSLVIKTGYLPNVVVETSLLDMYAKWGLVQF 358
             KPN     +V+ ACA   A L+ G+ IH   I++G+  N VV  +L++MYAK G V  
Sbjct: 317 GIKPNSITMVSVLPACAHLFA-LEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNS 375

Query: 359 SRILFDEMPE 388
           +  LF+ MP+
Sbjct: 376 AYKLFERMPK 385



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
 Frame = +2

Query: 62  FEQVPHRNKDTTLWTSIISAFNKSGNSYNAIQLFSQMLHQ-TKPNHFIYATVVRACATSA 238
           F Q   RN +  +W   I  + K+G    A++L+ QM      P+  ++ +V++AC  S 
Sbjct: 76  FTQTDIRN-NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACG-SQ 133

Query: 239 AYLQLGKTIHSLVIKTGYLPNVVVETSLLDMYAKWGLVQFSRILFDEMPE 388
           + LQ G+ +H  +I  G+  +V+V T+L  MY K G ++ +R +FD MP+
Sbjct: 134 SDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPK 183


>ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/119 (42%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
 Frame = +2

Query: 35  NSLTYAYQLFEQVPHRNKDTTLWTSIISAFNKSGNSYNAIQLFSQMLHQ-TKPNHFIYAT 211
           +SL  A  +F+ +P RN     WT++ISA+++ G +  A+ LF QML   T+PN F +AT
Sbjct: 107 DSLRDARHVFDVMPERN--VVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFAT 164

Query: 212 VVRACATSAAYLQLGKTIHSLVIKTGYLPNVVVETSLLDMYAKWGLVQFSRILFDEMPE 388
           V+ +C  S+ ++ LG+ IHS +IK  Y  +V V +SLLDMYAK G +  +R +F  +PE
Sbjct: 165 VLTSCIGSSGFV-LGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPE 222



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/110 (29%), Positives = 63/110 (57%)
 Frame = +2

Query: 59  LFEQVPHRNKDTTLWTSIISAFNKSGNSYNAIQLFSQMLHQTKPNHFIYATVVRACATSA 238
           +F+ +P R  D    T+IIS + + G    A++LF ++  +   ++++  T V    +  
Sbjct: 216 IFQCLPER--DVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGL 273

Query: 239 AYLQLGKTIHSLVIKTGYLPNVVVETSLLDMYAKWGLVQFSRILFDEMPE 388
           A L  GK +H+ ++++     VV++ SL+DMY+K G + ++R +FD + E
Sbjct: 274 AALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHE 323


>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 50/129 (38%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
 Frame = +2

Query: 5   LNAYVNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFNKSGNSYNAIQLFSQMLHQ- 181
           +N Y  +Q+     ++ Q+F++ P   K +T W+S+ISAF ++     A+Q F +ML+  
Sbjct: 67  INLYSKTQLP---LFSLQVFDETP--KKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121

Query: 182 TKPNHFIYATVVRACATSAAYLQLGKTIHSLVIKTGYLPNVVVETSLLDMYAKWGLVQFS 361
            +P+  IY +  +AC        +GK++H L +KTGY  +V V +SL+DMYAK G +  +
Sbjct: 122 VRPDDHIYPSATKACGFLRRS-DVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180

Query: 362 RILFDEMPE 388
           R LFDEMPE
Sbjct: 181 RHLFDEMPE 189



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/113 (30%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
 Frame = +2

Query: 50  AYQLFEQVPHRNKDTTLWTSIISAFNKSGNSYNAIQLFSQ-MLHQTKPNHFIYATVVRAC 226
           A  LF+++P RN     W+ +I  + +  +   A+ LF Q ++     N F +++V+R C
Sbjct: 180 ARHLFDEMPERN--VVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVC 237

Query: 227 ATSAAYLQLGKTIHSLVIKTGYLPNVVVETSLLDMYAKWGLVQFSRILFDEMP 385
           ++S  +L+LGK IH L +K  +  +  V ++L+ +Y+K G+++ +  +FDE+P
Sbjct: 238 SSST-FLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIP 289