BLASTX nr result

ID: Coptis21_contig00039814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039814
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163819.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   212   2e-53
ref|XP_004137629.1| PREDICTED: ABC transporter G family member 1...   212   2e-53
ref|XP_002321525.1| white-brown-complex ABC transporter family [...   200   1e-49
ref|XP_002318509.1| white-brown-complex ABC transporter family [...   196   2e-48
ref|XP_002530787.1| ATP-binding cassette transporter, putative [...   196   2e-48

>ref|XP_004163819.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
            1-like [Cucumis sativus]
          Length = 813

 Score =  212 bits (540), Expect = 2e-53
 Identities = 97/127 (76%), Positives = 112/127 (88%)
 Frame = -3

Query: 423  LFFLTCGFFLKRSEIPLGWSWLHYISAIKYPFEALLTNEFKGKDCYTGDPKDLSPGPLGN 244
            +FFLTCGFFLKR++IP+ W WLHYISAIKYPFE+LL NEFKGK CY+G+P DLSPGP+G+
Sbjct: 688  IFFLTCGFFLKRTQIPVYWRWLHYISAIKYPFESLLINEFKGKRCYSGNPSDLSPGPMGD 747

Query: 243  VKFSLLHNQTAASLDPSCILIGEDVLSSMDLNIEKIWVDIAILLAWGVLYRLFFYVVLRF 64
            V+FS LHN T+  L P C+LIGEDVL SMD+N+E IW D+AILLAWG LYRLFFYVVLRF
Sbjct: 748  VRFSKLHN-TSTDLKPDCLLIGEDVLFSMDINMESIWYDVAILLAWGFLYRLFFYVVLRF 806

Query: 63   YSKNERK 43
            YSKNERK
Sbjct: 807  YSKNERK 813


>ref|XP_004137629.1| PREDICTED: ABC transporter G family member 1-like [Cucumis sativus]
          Length = 814

 Score =  212 bits (540), Expect = 2e-53
 Identities = 97/127 (76%), Positives = 112/127 (88%)
 Frame = -3

Query: 423  LFFLTCGFFLKRSEIPLGWSWLHYISAIKYPFEALLTNEFKGKDCYTGDPKDLSPGPLGN 244
            +FFLTCGFFLKR++IP+ W WLHYISAIKYPFE+LL NEFKGK CY+G+P DLSPGP+G+
Sbjct: 689  IFFLTCGFFLKRTQIPVYWRWLHYISAIKYPFESLLINEFKGKRCYSGNPSDLSPGPMGD 748

Query: 243  VKFSLLHNQTAASLDPSCILIGEDVLSSMDLNIEKIWVDIAILLAWGVLYRLFFYVVLRF 64
            V+FS LHN T+  L P C+LIGEDVL SMD+N+E IW D+AILLAWG LYRLFFYVVLRF
Sbjct: 749  VRFSKLHN-TSTDLKPDCLLIGEDVLFSMDINMESIWYDVAILLAWGFLYRLFFYVVLRF 807

Query: 63   YSKNERK 43
            YSKNERK
Sbjct: 808  YSKNERK 814


>ref|XP_002321525.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222868521|gb|EEF05652.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 661

 Score =  200 bits (508), Expect = 1e-49
 Identities = 86/127 (67%), Positives = 108/127 (85%)
 Frame = -3

Query: 423 LFFLTCGFFLKRSEIPLGWSWLHYISAIKYPFEALLTNEFKGKDCYTGDPKDLSPGPLGN 244
           LFFLTCGFFLKR +IP+ W WLHY+SAIKYPFE +L+NEFKG  CY+G P +LSPGPLG 
Sbjct: 535 LFFLTCGFFLKRLQIPIYWRWLHYLSAIKYPFEGMLSNEFKGLRCYSGKPSELSPGPLGE 594

Query: 243 VKFSLLHNQTAASLDPSCILIGEDVLSSMDLNIEKIWVDIAILLAWGVLYRLFFYVVLRF 64
           +++S LHN++ A L+P+C+L+G+DVL SMD+ ++ IW DI ILLAWGVLYR FFY+VLRF
Sbjct: 595 IRWSQLHNESIAKLEPNCMLVGQDVLFSMDITMDNIWYDIGILLAWGVLYRFFFYLVLRF 654

Query: 63  YSKNERK 43
           YS N+RK
Sbjct: 655 YSNNQRK 661


>ref|XP_002318509.1| white-brown-complex ABC transporter family [Populus trichocarpa]
            gi|222859182|gb|EEE96729.1| white-brown-complex ABC
            transporter family [Populus trichocarpa]
          Length = 812

 Score =  196 bits (498), Expect = 2e-48
 Identities = 87/127 (68%), Positives = 107/127 (84%)
 Frame = -3

Query: 423  LFFLTCGFFLKRSEIPLGWSWLHYISAIKYPFEALLTNEFKGKDCYTGDPKDLSPGPLGN 244
            LFFLTCGFFLKR +IP+ W WLHYISAIKYPFE +L+NEFKG  CY+G+P +LSPGPLG 
Sbjct: 688  LFFLTCGFFLKRLQIPVYWRWLHYISAIKYPFEGMLSNEFKGSRCYSGNPSELSPGPLGE 747

Query: 243  VKFSLLHNQTAASLDPSCILIGEDVLSSMDLNIEKIWVDIAILLAWGVLYRLFFYVVLRF 64
            ++ S LHN   + L+P+C+LIG+D+L SMD+ ++ IW DIAILLAWGVLYR FFY+VLRF
Sbjct: 748  IRLSQLHND--SKLEPNCMLIGQDILFSMDIKMDSIWYDIAILLAWGVLYRFFFYLVLRF 805

Query: 63   YSKNERK 43
            YS N+RK
Sbjct: 806  YSNNQRK 812


>ref|XP_002530787.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223529642|gb|EEF31588.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 814

 Score =  196 bits (497), Expect = 2e-48
 Identities = 90/127 (70%), Positives = 104/127 (81%)
 Frame = -3

Query: 423  LFFLTCGFFLKRSEIPLGWSWLHYISAIKYPFEALLTNEFKGKDCYTGDPKDLSPGPLGN 244
            LFFLTCGFFLKR++IP+ W WLHYISAIKYPFEA+L+NEFKG  CY G+P DLSPGPLG 
Sbjct: 690  LFFLTCGFFLKRTQIPIYWRWLHYISAIKYPFEAMLSNEFKGTKCYNGNPVDLSPGPLGE 749

Query: 243  VKFSLLHNQTAASLDPSCILIGEDVLSSMDLNIEKIWVDIAILLAWGVLYRLFFYVVLRF 64
            +K S LHN        +C LIGED+L SMD+ ++ +W D+ ILLAWGVLYRLFFYVVLRF
Sbjct: 750  IKTSKLHNNFTTG--TNCPLIGEDILFSMDIKMDNLWYDVLILLAWGVLYRLFFYVVLRF 807

Query: 63   YSKNERK 43
            YSKNERK
Sbjct: 808  YSKNERK 814


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