BLASTX nr result
ID: Coptis21_contig00039814
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039814 (425 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004163819.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor... 212 2e-53 ref|XP_004137629.1| PREDICTED: ABC transporter G family member 1... 212 2e-53 ref|XP_002321525.1| white-brown-complex ABC transporter family [... 200 1e-49 ref|XP_002318509.1| white-brown-complex ABC transporter family [... 196 2e-48 ref|XP_002530787.1| ATP-binding cassette transporter, putative [... 196 2e-48 >ref|XP_004163819.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member 1-like [Cucumis sativus] Length = 813 Score = 212 bits (540), Expect = 2e-53 Identities = 97/127 (76%), Positives = 112/127 (88%) Frame = -3 Query: 423 LFFLTCGFFLKRSEIPLGWSWLHYISAIKYPFEALLTNEFKGKDCYTGDPKDLSPGPLGN 244 +FFLTCGFFLKR++IP+ W WLHYISAIKYPFE+LL NEFKGK CY+G+P DLSPGP+G+ Sbjct: 688 IFFLTCGFFLKRTQIPVYWRWLHYISAIKYPFESLLINEFKGKRCYSGNPSDLSPGPMGD 747 Query: 243 VKFSLLHNQTAASLDPSCILIGEDVLSSMDLNIEKIWVDIAILLAWGVLYRLFFYVVLRF 64 V+FS LHN T+ L P C+LIGEDVL SMD+N+E IW D+AILLAWG LYRLFFYVVLRF Sbjct: 748 VRFSKLHN-TSTDLKPDCLLIGEDVLFSMDINMESIWYDVAILLAWGFLYRLFFYVVLRF 806 Query: 63 YSKNERK 43 YSKNERK Sbjct: 807 YSKNERK 813 >ref|XP_004137629.1| PREDICTED: ABC transporter G family member 1-like [Cucumis sativus] Length = 814 Score = 212 bits (540), Expect = 2e-53 Identities = 97/127 (76%), Positives = 112/127 (88%) Frame = -3 Query: 423 LFFLTCGFFLKRSEIPLGWSWLHYISAIKYPFEALLTNEFKGKDCYTGDPKDLSPGPLGN 244 +FFLTCGFFLKR++IP+ W WLHYISAIKYPFE+LL NEFKGK CY+G+P DLSPGP+G+ Sbjct: 689 IFFLTCGFFLKRTQIPVYWRWLHYISAIKYPFESLLINEFKGKRCYSGNPSDLSPGPMGD 748 Query: 243 VKFSLLHNQTAASLDPSCILIGEDVLSSMDLNIEKIWVDIAILLAWGVLYRLFFYVVLRF 64 V+FS LHN T+ L P C+LIGEDVL SMD+N+E IW D+AILLAWG LYRLFFYVVLRF Sbjct: 749 VRFSKLHN-TSTDLKPDCLLIGEDVLFSMDINMESIWYDVAILLAWGFLYRLFFYVVLRF 807 Query: 63 YSKNERK 43 YSKNERK Sbjct: 808 YSKNERK 814 >ref|XP_002321525.1| white-brown-complex ABC transporter family [Populus trichocarpa] gi|222868521|gb|EEF05652.1| white-brown-complex ABC transporter family [Populus trichocarpa] Length = 661 Score = 200 bits (508), Expect = 1e-49 Identities = 86/127 (67%), Positives = 108/127 (85%) Frame = -3 Query: 423 LFFLTCGFFLKRSEIPLGWSWLHYISAIKYPFEALLTNEFKGKDCYTGDPKDLSPGPLGN 244 LFFLTCGFFLKR +IP+ W WLHY+SAIKYPFE +L+NEFKG CY+G P +LSPGPLG Sbjct: 535 LFFLTCGFFLKRLQIPIYWRWLHYLSAIKYPFEGMLSNEFKGLRCYSGKPSELSPGPLGE 594 Query: 243 VKFSLLHNQTAASLDPSCILIGEDVLSSMDLNIEKIWVDIAILLAWGVLYRLFFYVVLRF 64 +++S LHN++ A L+P+C+L+G+DVL SMD+ ++ IW DI ILLAWGVLYR FFY+VLRF Sbjct: 595 IRWSQLHNESIAKLEPNCMLVGQDVLFSMDITMDNIWYDIGILLAWGVLYRFFFYLVLRF 654 Query: 63 YSKNERK 43 YS N+RK Sbjct: 655 YSNNQRK 661 >ref|XP_002318509.1| white-brown-complex ABC transporter family [Populus trichocarpa] gi|222859182|gb|EEE96729.1| white-brown-complex ABC transporter family [Populus trichocarpa] Length = 812 Score = 196 bits (498), Expect = 2e-48 Identities = 87/127 (68%), Positives = 107/127 (84%) Frame = -3 Query: 423 LFFLTCGFFLKRSEIPLGWSWLHYISAIKYPFEALLTNEFKGKDCYTGDPKDLSPGPLGN 244 LFFLTCGFFLKR +IP+ W WLHYISAIKYPFE +L+NEFKG CY+G+P +LSPGPLG Sbjct: 688 LFFLTCGFFLKRLQIPVYWRWLHYISAIKYPFEGMLSNEFKGSRCYSGNPSELSPGPLGE 747 Query: 243 VKFSLLHNQTAASLDPSCILIGEDVLSSMDLNIEKIWVDIAILLAWGVLYRLFFYVVLRF 64 ++ S LHN + L+P+C+LIG+D+L SMD+ ++ IW DIAILLAWGVLYR FFY+VLRF Sbjct: 748 IRLSQLHND--SKLEPNCMLIGQDILFSMDIKMDSIWYDIAILLAWGVLYRFFFYLVLRF 805 Query: 63 YSKNERK 43 YS N+RK Sbjct: 806 YSNNQRK 812 >ref|XP_002530787.1| ATP-binding cassette transporter, putative [Ricinus communis] gi|223529642|gb|EEF31588.1| ATP-binding cassette transporter, putative [Ricinus communis] Length = 814 Score = 196 bits (497), Expect = 2e-48 Identities = 90/127 (70%), Positives = 104/127 (81%) Frame = -3 Query: 423 LFFLTCGFFLKRSEIPLGWSWLHYISAIKYPFEALLTNEFKGKDCYTGDPKDLSPGPLGN 244 LFFLTCGFFLKR++IP+ W WLHYISAIKYPFEA+L+NEFKG CY G+P DLSPGPLG Sbjct: 690 LFFLTCGFFLKRTQIPIYWRWLHYISAIKYPFEAMLSNEFKGTKCYNGNPVDLSPGPLGE 749 Query: 243 VKFSLLHNQTAASLDPSCILIGEDVLSSMDLNIEKIWVDIAILLAWGVLYRLFFYVVLRF 64 +K S LHN +C LIGED+L SMD+ ++ +W D+ ILLAWGVLYRLFFYVVLRF Sbjct: 750 IKTSKLHNNFTTG--TNCPLIGEDILFSMDIKMDNLWYDVLILLAWGVLYRLFFYVVLRF 807 Query: 63 YSKNERK 43 YSKNERK Sbjct: 808 YSKNERK 814