BLASTX nr result

ID: Coptis21_contig00039796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039796
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632918.1| PREDICTED: putative leucine-rich repeat rece...    86   2e-15
emb|CBI25232.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002332048.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002512743.1| serine-threonine protein kinase, plant-type,...    68   9e-10
ref|XP_003542139.1| PREDICTED: putative leucine-rich repeat rece...    62   5e-08

>ref|XP_003632918.1| PREDICTED: putative leucine-rich repeat receptor-like
           serine/threonine-protein kinase At2g24130-like [Vitis
           vinifera]
          Length = 992

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/92 (53%), Positives = 61/92 (66%)
 Frame = +1

Query: 4   IPTGGVFNLVTNRTFLGNADDLCGSVPGIHICWGRKHSLHSRKFVIKVSVGISASLFLFT 183
           IP+GG+F  VTN +FLGN + LCGSV GI  C  +++ LHS +FVI  SV IS S FL T
Sbjct: 557 IPSGGIFASVTNLSFLGNPN-LCGSVVGIPTCRKKRNWLHSHRFVIIFSVVISISAFLST 615

Query: 184 IFCWIGHRYIKGIISTEKDELFSTSAPELKFN 279
           I C IG RYIK I+S+ + E    S P+L  N
Sbjct: 616 IGCVIGCRYIKRIMSSGRSETVRKSTPDLMHN 647


>emb|CBI25232.3| unnamed protein product [Vitis vinifera]
          Length = 774

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/92 (53%), Positives = 61/92 (66%)
 Frame = +1

Query: 4   IPTGGVFNLVTNRTFLGNADDLCGSVPGIHICWGRKHSLHSRKFVIKVSVGISASLFLFT 183
           IP+GG+F  VTN +FLGN + LCGSV GI  C  +++ LHS +FVI  SV IS S FL T
Sbjct: 501 IPSGGIFASVTNLSFLGNPN-LCGSVVGIPTCRKKRNWLHSHRFVIIFSVVISISAFLST 559

Query: 184 IFCWIGHRYIKGIISTEKDELFSTSAPELKFN 279
           I C IG RYIK I+S+ + E    S P+L  N
Sbjct: 560 IGCVIGCRYIKRIMSSGRSETVRKSTPDLMHN 591


>ref|XP_002332048.1| predicted protein [Populus trichocarpa] gi|222831934|gb|EEE70411.1|
           predicted protein [Populus trichocarpa]
          Length = 911

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
 Frame = +1

Query: 4   IPTGGVFNLVTNRTFLGNADDLCGSVPGIHICWGRKHSLHSRKFVIKVSVGISASLFLFT 183
           IP+GGVFN VT+++F+GN  DLCG+V G+  C  ++H    R F+I   +   AS FL T
Sbjct: 499 IPSGGVFNSVTDKSFIGN-QDLCGAVSGMPKCSHKRHWFRLRLFLIVFVLLTFASAFLTT 557

Query: 184 IFCWIGHRYIKGIIST----EKDELFSTSAPELKFN 279
           IFC IG R IK ++S+    + ++      PEL  N
Sbjct: 558 IFCVIGIRRIKAMVSSGNSVDTEQARKPETPELIHN 593


>ref|XP_002512743.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223547754|gb|EEF49246.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 969

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/77 (48%), Positives = 50/77 (64%)
 Frame = +1

Query: 4   IPTGGVFNLVTNRTFLGNADDLCGSVPGIHICWGRKHSLHSRKFVIKVSVGISASLFLFT 183
           IP+GG+FN +T+ +FLGN   LCG+  GI  C   +H  HS KF+I   + IS S FL T
Sbjct: 566 IPSGGIFNSLTSWSFLGNRR-LCGAFSGILACSPTRHWFHSNKFLIIFIIVISVSAFLST 624

Query: 184 IFCWIGHRYIKGIISTE 234
           I C  G R+IK +IS++
Sbjct: 625 ICCVTGIRWIKLLISSQ 641


>ref|XP_003542139.1| PREDICTED: putative leucine-rich repeat receptor-like
           serine/threonine-protein kinase At2g24130-like [Glycine
           max]
          Length = 955

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
 Frame = +1

Query: 4   IPTGGVFNLVTNRTFLGNADDLCGSVPGIHICWGRKHSLHSRKFVIKVSVGISASLFLFT 183
           IP+GG+FN V+  +FLGN   LCG++ GI +C  R+   H+R  +I   + I  S  L  
Sbjct: 563 IPSGGIFNSVSTLSFLGNPQ-LCGTIAGISLCSQRRKWFHTRSLLIIFILVIFISTLLSI 621

Query: 184 IFCWIGHRYIKGIISTEKDELF-STSAPELKFN 279
           I C IG + +K IIS+++ E   + + PEL  N
Sbjct: 622 ICCVIGCKRLKVIISSQRTEASKNATRPELISN 654


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