BLASTX nr result

ID: Coptis21_contig00039793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039793
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    58   9e-07
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +2

Query: 98   VSSVISNGRWI-AVVQNLPQGTPKNLIMSTEINIYSEE-DRIIW*PAANGKFTTKSAYDA 271
            V  ++ NG+W  +++QN      K +I    +N+ +EE D+ +W P + G FT  SA++ 
Sbjct: 833  VKEILGNGKWNWSILQNQLPNQIKVMITGLGLNLNNEEQDKPVWSPTSAGNFTVTSAWNI 892

Query: 272  TRTPRAKVK*FNMVWGKVVIPKHSFTSWQLISSSLP 379
             R    ++  FN +W K +  K SF +W+ I + LP
Sbjct: 893  CRHKGIEITDFNKIWHKDIPFKMSFLTWKAIINRLP 928


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
 Frame = +2

Query: 80   MPDDARVSSVISNGRW-IAVVQNLPQGTPKNLIMSTEINIYSEEDRIIW*PAANGKFTTK 256
            M  +A+V+ +I N  W     Q +        I S       ++D IIW  + N +F+ K
Sbjct: 801  MAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVK 860

Query: 257  SAYDATRTPRAKVK*FNMVWGKVVIPKHSFTSWQLISSSLPIQDRL 394
             A++  R  R  V+  ++VW K  +P+HSF  W ++   L  QD+L
Sbjct: 861  VAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKL 906


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
 Frame = +2

Query: 80  MPDDARVSSVISNGRW-IAVVQNLPQGTPKNLIMSTEINIYSEEDRIIW*PAANGKFTTK 256
           M  +A+V+ +I N  W     Q +        I S       ++D I+W  + N +F+ K
Sbjct: 86  MAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVK 145

Query: 257 SAYDATRTPRAKVK*FNMVWGKVVIPKHSFTSWQLISSSLPIQDRL 394
            A++  R  R  V+  ++VW K  +P+HSF  W ++   L  QD+L
Sbjct: 146 VAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKL 191


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
 Frame = +2

Query: 80  MPDDARVSSVISNGRW-IAVVQNLPQGTPKNLIMSTEINIYSEEDRIIW*PAANGKFTTK 256
           M  +A+V+ +I N  W     Q +        I S       ++D ++W  + N +F+ K
Sbjct: 268 MAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVK 327

Query: 257 SAYDATRTPRAKVK*FNMVWGKVVIPKHSFTSWQLISSSLPIQDRL 394
            A++  R  R  V+  ++VW K  +P+HSF  W  +   L  QD+L
Sbjct: 328 VAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKL 373


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
 Frame = +2

Query: 80   MPDDARVSSVISNGRW-IAVVQNLPQGTPKNLIMSTEINIYSEEDRIIW*PAANGKFTTK 256
            M  +A+V+ +I N  W     Q +        I S       ++D I+W  + N +F  K
Sbjct: 1141 MAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFLVK 1200

Query: 257  SAYDATRTPRAKVK*FNMVWGKVVIPKHSFTSWQLISSSLPIQDRL 394
             A++  R  R  V+  ++VW K  +P+HSF  W  +   L  QD+L
Sbjct: 1201 VAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKL 1246


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