BLASTX nr result
ID: Coptis21_contig00039792
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039792 (248 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280593.1| PREDICTED: mitochondrial protein import prot... 83 2e-14 ref|NP_001105159.1| zinc ribbon 1 [Zea mays] gi|48596295|emb|CAD... 81 8e-14 tpg|DAA58878.1| TPA: etched1 [Zea mays] 81 8e-14 ref|XP_002458121.1| hypothetical protein SORBIDRAFT_03g027210 [S... 81 8e-14 ref|NP_001105722.1| etched1 [Zea mays] gi|48596291|emb|CAD45038.... 81 1e-13 >ref|XP_002280593.1| PREDICTED: mitochondrial protein import protein ZIM17 [Vitis vinifera] gi|297737905|emb|CBI27106.3| unnamed protein product [Vitis vinifera] Length = 173 Score = 83.2 bits (204), Expect = 2e-14 Identities = 42/59 (71%), Positives = 48/59 (81%), Gaps = 4/59 (6%) Frame = -3 Query: 165 LASESHPNKPLE----ETNIDIKLPRRSLFVQFTCNACGERTERLINRLAYERGTVFVQ 1 ++S SH N + E +IDIKLPRRSL VQFTC+ACGERTERLINRLA+ERGTVFVQ Sbjct: 80 VSSSSHSNSVSDDSCSEASIDIKLPRRSLIVQFTCDACGERTERLINRLAFERGTVFVQ 138 >ref|NP_001105159.1| zinc ribbon 1 [Zea mays] gi|48596295|emb|CAD45040.1| zinc ribbon 1 [Zea mays] gi|224030597|gb|ACN34374.1| unknown [Zea mays] gi|413934849|gb|AFW69400.1| Zinc ribbon 1 [Zea mays] Length = 162 Score = 81.3 bits (199), Expect = 8e-14 Identities = 42/60 (70%), Positives = 50/60 (83%) Frame = -3 Query: 180 SNEDKLASESHPNKPLEETNIDIKLPRRSLFVQFTCNACGERTERLINRLAYERGTVFVQ 1 S+ K S++ P+ P E T IDIKLPRRSL VQFTCNACGERT+RLINR+AYERGT+F+Q Sbjct: 65 SSSGKANSDAVPS-PTEAT-IDIKLPRRSLLVQFTCNACGERTKRLINRVAYERGTIFLQ 122 >tpg|DAA58878.1| TPA: etched1 [Zea mays] Length = 166 Score = 81.3 bits (199), Expect = 8e-14 Identities = 42/66 (63%), Positives = 48/66 (72%) Frame = -3 Query: 198 IIATSDSNEDKLASESHPNKPLEETNIDIKLPRRSLFVQFTCNACGERTERLINRLAYER 19 I++ S S E + P E IDIKLPRRSL VQFTCNACGERT+RLINR+AYER Sbjct: 65 IVSASSSGEANSDAAPSPT----EAAIDIKLPRRSLLVQFTCNACGERTKRLINRVAYER 120 Query: 18 GTVFVQ 1 GTVF+Q Sbjct: 121 GTVFLQ 126 >ref|XP_002458121.1| hypothetical protein SORBIDRAFT_03g027210 [Sorghum bicolor] gi|241930096|gb|EES03241.1| hypothetical protein SORBIDRAFT_03g027210 [Sorghum bicolor] Length = 163 Score = 81.3 bits (199), Expect = 8e-14 Identities = 41/66 (62%), Positives = 48/66 (72%) Frame = -3 Query: 198 IIATSDSNEDKLASESHPNKPLEETNIDIKLPRRSLFVQFTCNACGERTERLINRLAYER 19 +++ S S E + P E IDIKLPRRSL VQFTCNACGERT+RLINR+AYER Sbjct: 62 VVSASSSGEANSDAVPSPT----EATIDIKLPRRSLLVQFTCNACGERTKRLINRVAYER 117 Query: 18 GTVFVQ 1 GTVF+Q Sbjct: 118 GTVFLQ 123 >ref|NP_001105722.1| etched1 [Zea mays] gi|48596291|emb|CAD45038.1| ETCHED1 protein [Zea mays] gi|48596293|emb|CAD45039.1| ETCHED1 protein [Zea mays] Length = 163 Score = 80.9 bits (198), Expect = 1e-13 Identities = 42/66 (63%), Positives = 48/66 (72%) Frame = -3 Query: 198 IIATSDSNEDKLASESHPNKPLEETNIDIKLPRRSLFVQFTCNACGERTERLINRLAYER 19 I++ S S E + P E IDIKLPRRSL VQFTCNACGERT+RLINR+AYER Sbjct: 62 IVSASSSGEANSDAVPSPT----EAAIDIKLPRRSLLVQFTCNACGERTKRLINRVAYER 117 Query: 18 GTVFVQ 1 GTVF+Q Sbjct: 118 GTVFLQ 123