BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039780
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat...   275   5e-72
ref|XP_002521068.1| pentatricopeptide repeat-containing protein,...   266   2e-69
ref|XP_002301797.1| predicted protein [Populus trichocarpa] gi|2...   248   6e-64
tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea m...   247   1e-63
ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [S...   239   2e-61

>ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  275 bits (703), Expect = 5e-72
 Identities = 129/200 (64%), Positives = 166/200 (83%)
 Frame = -1

Query: 603 GYGKEALLLFLEMKETRIKPDHATFASLLSACSHSGLVEEGLYWFNLMSKEFNIHPSEKH 424
           G G+EAL LFL+M+ET +KPDHATFASLLSA SHSGLVE+G YWF++M  E+ I PSEKH
Sbjct: 386 GSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKH 445

Query: 423 YACLVDLLARAGQVEEAYKMIESMVIEPGVTVWVALLAGCGNHRKLDLGQLVAQKVLELR 244
           YAC+VDLL+RAG+VEEA ++IESM+ EPG+ +WVALL+GC NH K  +G++ A+KVLEL 
Sbjct: 446 YACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELN 505

Query: 243 PDDPGIYTLVSNVFASAKKWDEVATVRKVMKTAGFKKVPGYSVVEVNNGLYTFGIEDKSH 64
           PDDPGIY+LVSN FA+A++WDEVA VRK+MK  G KKVPGYSV+EVN  L+ F +EDKSH
Sbjct: 506 PDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSH 565

Query: 63  PEHDMLVTILDWLYQEMRAL 4
            +++ ++ +L  L  EM+A+
Sbjct: 566 HQYEEIMQVLGKLDYEMKAM 585


>ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539637|gb|EEF41219.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 579

 Score =  266 bits (680), Expect = 2e-69
 Identities = 128/201 (63%), Positives = 160/201 (79%)
 Frame = -1

Query: 603 GYGKEALLLFLEMKETRIKPDHATFASLLSACSHSGLVEEGLYWFNLMSKEFNIHPSEKH 424
           G G EAL LFL+MKET I PDHATFASLLSACSHSGLVEEG YWF+++  +  I PSEKH
Sbjct: 365 GDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKH 424

Query: 423 YACLVDLLARAGQVEEAYKMIESMVIEPGVTVWVALLAGCGNHRKLDLGQLVAQKVLELR 244
           YAC+VDLL+RAGQVEEAY++IESM I+PG+ +WVALL+GC NH+ L +G++VA+K+LE  
Sbjct: 425 YACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKILESN 484

Query: 243 PDDPGIYTLVSNVFASAKKWDEVATVRKVMKTAGFKKVPGYSVVEVNNGLYTFGIEDKSH 64
           PDD GIY LVSN F+ AKKWD+ A  RK+MK  G +KVPGYS VEVN  L  F +EDK+H
Sbjct: 485 PDDLGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYSAVEVNGDLQAFLMEDKNH 544

Query: 63  PEHDMLVTILDWLYQEMRALK 1
            ++  ++ ILD L  EMR+++
Sbjct: 545 NQYQDILQILDILDNEMRSIR 565


>ref|XP_002301797.1| predicted protein [Populus trichocarpa] gi|222843523|gb|EEE81070.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score =  248 bits (633), Expect = 6e-64
 Identities = 120/201 (59%), Positives = 151/201 (75%)
 Frame = -1

Query: 603 GYGKEALLLFLEMKETRIKPDHATFASLLSACSHSGLVEEGLYWFNLMSKEFNIHPSEKH 424
           G GKE L LFL+MKE  I PDHATFASLLSA SHSG V+ G YWFN M  E  I PSEKH
Sbjct: 388 GDGKEVLSLFLKMKEANISPDHATFASLLSALSHSGQVDVGQYWFNAMVNECKIPPSEKH 447

Query: 423 YACLVDLLARAGQVEEAYKMIESMVIEPGVTVWVALLAGCGNHRKLDLGQLVAQKVLELR 244
           YAC+VDL +RAG+VEEAY++IESM  EPG+ +WVALL+GC N+R L  G++ A+K+L+L 
Sbjct: 448 YACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALLSGCHNYRNLLFGEVAAKKILDLN 507

Query: 243 PDDPGIYTLVSNVFASAKKWDEVATVRKVMKTAGFKKVPGYSVVEVNNGLYTFGIEDKSH 64
           PDD GIY LVSN F+ A+ WD V+ +RK+MK  G KKVPGYS VEVN     F +EDK+H
Sbjct: 508 PDDLGIYALVSNFFSLARMWDRVSILRKIMKETGMKKVPGYSAVEVNGKHEAFLVEDKNH 567

Query: 63  PEHDMLVTILDWLYQEMRALK 1
            +++ ++ +LD L  EMR ++
Sbjct: 568 HQYEEILQMLDSLDNEMRVIR 588


>tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  247 bits (631), Expect = 1e-63
 Identities = 118/200 (59%), Positives = 155/200 (77%)
 Frame = -1

Query: 603 GYGKEALLLFLEMKETRIKPDHATFASLLSACSHSGLVEEGLYWFNLMSKEFNIHPSEKH 424
           G G +AL LF E+ ET IKPDHATFASLLSA SHSGLVEEG +WF+ M KEF I P+EKH
Sbjct: 388 GCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKH 447

Query: 423 YACLVDLLARAGQVEEAYKMIESMVIEPGVTVWVALLAGCGNHRKLDLGQLVAQKVLELR 244
           Y C+VDLLAR+G VEEA  M+ SM  EP + +WV LL+GC N++KL+LG+ +A+K+LELR
Sbjct: 448 YVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILELR 507

Query: 243 PDDPGIYTLVSNVFASAKKWDEVATVRKVMKTAGFKKVPGYSVVEVNNGLYTFGIEDKSH 64
           P+D G+  LVSN++A+AKKWD+V  +RK+MK +G KKVPGYS++EV    + F +ED+SH
Sbjct: 508 PEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSH 567

Query: 63  PEHDMLVTILDWLYQEMRAL 4
           P+H  ++ ++  L  EMR L
Sbjct: 568 PQHREILKMVAKLNSEMRKL 587


>ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
           gi|241918863|gb|EER92007.1| hypothetical protein
           SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  239 bits (611), Expect = 2e-61
 Identities = 114/200 (57%), Positives = 155/200 (77%)
 Frame = -1

Query: 603 GYGKEALLLFLEMKETRIKPDHATFASLLSACSHSGLVEEGLYWFNLMSKEFNIHPSEKH 424
           G G +AL LF E+ ET IKPDHATFASLLSA SHSGLVEEG +WF+ M  EF I P+EKH
Sbjct: 392 GCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKH 451

Query: 423 YACLVDLLARAGQVEEAYKMIESMVIEPGVTVWVALLAGCGNHRKLDLGQLVAQKVLELR 244
             C+VDLLAR+G VEEA +M+ SM  EP + +WVALL+GC N++KL+LG+ +A+K+LE +
Sbjct: 452 CVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQ 511

Query: 243 PDDPGIYTLVSNVFASAKKWDEVATVRKVMKTAGFKKVPGYSVVEVNNGLYTFGIEDKSH 64
           P+D G+  LVSN++A+AKKWD+V  +RK+MK +G KKVPGYS++EV+   + F +ED+SH
Sbjct: 512 PEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSH 571

Query: 63  PEHDMLVTILDWLYQEMRAL 4
           P+H  ++ ++  L  EMR +
Sbjct: 572 PQHQEILKMISKLSFEMRKM 591