BLASTX nr result

ID: Coptis21_contig00039753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039753
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31835.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002274647.1| PREDICTED: uncharacterized protein LOC100252...    89   4e-16
emb|CAN68387.1| hypothetical protein VITISV_012455 [Vitis vinifera]    89   4e-16
ref|XP_002510838.1| conserved hypothetical protein [Ricinus comm...    88   8e-16
ref|XP_004140790.1| PREDICTED: uncharacterized protein LOC101219...    85   5e-15

>emb|CBI31835.3| unnamed protein product [Vitis vinifera]
          Length = 313

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 57/104 (54%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
 Frame = -2

Query: 307 SACPPNRKKNEMNTLISNWISPLH---FPSQFRANTSNKIT-TTKRKKLSISVSLNDVKE 140
           S CP  RKK  MN +I   + PL    FP++ R++     T  T RK  SIS S      
Sbjct: 17  SRCPNTRKK--MNGVIWKPLIPLKPPSFPAKARSSHLPVSTINTTRKFQSISAS-----N 69

Query: 139 QDQQLNLSVLRFTLGIRGLDESNLPRWIGYTFGSLLFLNHFIGS 8
           Q QQLNLSVLRFTLGI G DES LPRWIGY FGS + LNHF+GS
Sbjct: 70  QQQQLNLSVLRFTLGIPGFDESYLPRWIGYGFGSFILLNHFVGS 113


>ref|XP_002274647.1| PREDICTED: uncharacterized protein LOC100252183 [Vitis vinifera]
          Length = 311

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 57/104 (54%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
 Frame = -2

Query: 307 SACPPNRKKNEMNTLISNWISPLH---FPSQFRANTSNKIT-TTKRKKLSISVSLNDVKE 140
           S CP  RKK  MN +I   + PL    FP++ R++     T  T RK  SIS S      
Sbjct: 17  SRCPNTRKK--MNGVIWKPLIPLKPPSFPAKARSSHLPVSTINTTRKFQSISAS-----N 69

Query: 139 QDQQLNLSVLRFTLGIRGLDESNLPRWIGYTFGSLLFLNHFIGS 8
           Q QQLNLSVLRFTLGI G DES LPRWIGY FGS + LNHF+GS
Sbjct: 70  QQQQLNLSVLRFTLGIPGFDESYLPRWIGYGFGSFILLNHFVGS 113


>emb|CAN68387.1| hypothetical protein VITISV_012455 [Vitis vinifera]
          Length = 349

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 57/104 (54%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
 Frame = -2

Query: 307 SACPPNRKKNEMNTLISNWISPLH---FPSQFRANTSNKIT-TTKRKKLSISVSLNDVKE 140
           S CP  RKK  MN +I   + PL    FP++ R++     T  T RK  SIS S      
Sbjct: 17  SRCPNTRKK--MNGVIWKPLIPLKPPSFPAKARSSHLPVSTINTTRKFQSISAS-----N 69

Query: 139 QDQQLNLSVLRFTLGIRGLDESNLPRWIGYTFGSLLFLNHFIGS 8
           Q QQLNLSVLRFTLGI G DES LPRWIGY FGS + LNHF+GS
Sbjct: 70  QQQQLNLSVLRFTLGIPGFDESYLPRWIGYGFGSFILLNHFVGS 113


>ref|XP_002510838.1| conserved hypothetical protein [Ricinus communis]
           gi|223549953|gb|EEF51440.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 308

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/86 (59%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
 Frame = -2

Query: 250 ISPLHFPSQFRANTSNKITTTKRKKLSISVSLNDV---KEQDQQLNLSVLRFTLGIRGLD 80
           I+PL    +FRAN S      K K  SI V +++    K+Q Q LNLSVLRFT GI GLD
Sbjct: 6   INPLITHPKFRANNS-----VKSKNASIIVRIDNSQRKKDQQQDLNLSVLRFTFGIPGLD 60

Query: 79  ESNLPRWIGYTFGSLLFLNHFIGSYS 2
           ES LPRWIGY FGSLL LNHF+GS S
Sbjct: 61  ESYLPRWIGYGFGSLLVLNHFLGSNS 86


>ref|XP_004140790.1| PREDICTED: uncharacterized protein LOC101219803 [Cucumis sativus]
           gi|449530412|ref|XP_004172189.1| PREDICTED:
           uncharacterized LOC101219803 [Cucumis sativus]
          Length = 288

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 51/86 (59%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
 Frame = -2

Query: 250 ISPLHFPSQFRANTS--NKITTTKRKKLSISVSLNDVKEQ-DQQLNLSVLRFTLGIRGLD 80
           IS +  PS     TS  +    +K K  +IS  L+D K   +QQLNLSVLRFTLGI GLD
Sbjct: 2   ISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLD 61

Query: 79  ESNLPRWIGYTFGSLLFLNHFIGSYS 2
           ES LPRWIGY FGSLL LNHF+GS S
Sbjct: 62  ESYLPRWIGYGFGSLLLLNHFVGSNS 87


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