BLASTX nr result

ID: Coptis21_contig00039740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039740
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325700.1| BED finger-nbs-lrr resistance protein [Popul...    73   3e-11
ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichoca...    72   6e-11
ref|XP_002283439.2| PREDICTED: probable disease resistance prote...    70   2e-10
ref|XP_002330398.1| BED finger-nbs-lrr resistance protein [Popul...    68   7e-10
ref|XP_002335862.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10

>ref|XP_002325700.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862575|gb|EEF00082.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1159

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 15/119 (12%)
 Frame = -1

Query: 447  MEEIV------KKGEVTECGNSSXXXXXXXXXXXLYFFSLPELRSICSGLLICDSLTTID 286
            M+EI+      ++G++ E  +++           L  F LPEL+SICS  LICDSL TI 
Sbjct: 1038 MDEIICGTRSDEEGDIGEESSNNNTEFKLPKLRSLLLFELPELKSICSAKLICDSLGTIS 1097

Query: 285  VWDCRKLKKLPLCGGNL-------PINLKHIK-GSKKWWEA-LEWDDNKAKMLLEPFFK 136
            + +C  LK++P+C   L       P +L +I    K+WWE+ +EWD   AK +L PF K
Sbjct: 1098 IRNCENLKRMPICFPLLENGQPSPPPSLTYIYIEPKEWWESVVEWDHPNAKNILRPFVK 1156


>ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862190|gb|EEE99696.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1199

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
 Frame = -1

Query: 468  EVWNSTLMEEIVKKGEVTECGNSSXXXXXXXXXXXLYFFSLPELRSICSGLLICDSLTTI 289
            +V +   MEEI+   +     ++S           L   +LPEL+SICS  LICDSL  I
Sbjct: 1089 QVQHCEKMEEIIGTTDEESSSSNSIMEFILPKFRILRLINLPELKSICSAKLICDSLEEI 1148

Query: 288  DVWDCRKLKKLPLCGGNLPINLKHIK-GSKKWWEA-LEWDDNKAKMLLEPFFK 136
             V +C+KL++LP+    LP +LK I+   K+WWE+ +EW++  AK +L PF K
Sbjct: 1149 IVDNCQKLRRLPI--RLLPPSLKKIEVYPKEWWESVVEWENPNAKEVLSPFVK 1199


>ref|XP_002283439.2| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1276

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
 Frame = -1

Query: 468  EVWNSTLMEEIVKKGEVTECGNSSXXXXXXXXXXXLYF--------FSLPELRSICSGLL 313
            +V N   ME+++   EV E                LYF         +LP+L+SI  G +
Sbjct: 1122 DVGNCRQMEDLIVAAEVEEEEEEEEEVINQRHNLILYFPNLQSLTLENLPKLKSIWKGTM 1181

Query: 312  ICDSLTTIDVWDCRKLKKLPLCGGNLPIN------------LKHIKGSKKWWEALEWDDN 169
             CDSL  + VW+C +L++LPL   ++ IN            LK I+G K+WW+ LEW+  
Sbjct: 1182 TCDSLQ-LTVWNCPELRRLPL---SVQINDGSGERRASTPPLKQIRGEKEWWDGLEWNTP 1237

Query: 168  KAKMLLEPFFKEDKEEADESTPV 100
             AK + EPF     +E   + P+
Sbjct: 1238 HAKSIFEPFTTFQTDENPFTLPI 1260


>ref|XP_002330398.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222871783|gb|EEF08914.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 901

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/104 (42%), Positives = 55/104 (52%), Gaps = 22/104 (21%)
 Frame = -1

Query: 357  FFSLPELRSICSGLLICDSLTTIDVWDCRKLKKLPLCGGNL-------PINLKHI-KGSK 202
            F  LPEL+SIC   LIC SL TI V DC KLK++PLC   L       P +L+ I    K
Sbjct: 795  FILLPELKSICRENLICSSLQTIIVRDCPKLKRMPLCLPVLDNGRPSPPPSLEEIYVDPK 854

Query: 201  KWWEALEWDDNKAKMLLEPFF--------------KEDKEEADE 112
            +WWE++EWD   +K  L PF               +ED E+ DE
Sbjct: 855  EWWESVEWDHPNSKDALLPFLVLGGGARLLEEEGDEEDVEDNDE 898


>ref|XP_002335862.1| predicted protein [Populus trichocarpa] gi|222835879|gb|EEE74300.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 9/80 (11%)
 Frame = -1

Query: 348 LPELRSICSGLLICDSLTTIDVWDCRKLKKLPLCGGNL-------PINLKHIKGS-KKWW 193
           LPEL+SICS  LIC+SL  I V  C+KLK++P+C   L       P +LK I+ S K+WW
Sbjct: 265 LPELKSICSAKLICNSLKKIRVSFCKKLKRMPICLPLLENGQPSPPPSLKKIEASPKEWW 324

Query: 192 E-ALEWDDNKAKMLLEPFFK 136
           E  +EW+   AK +L PF K
Sbjct: 325 ETVVEWEHPNAKDVLRPFVK 344


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