BLASTX nr result
ID: Coptis21_contig00039734
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039734 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase... 107 8e-22 ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244... 102 4e-20 ref|XP_003600608.1| Regulator of nonsense transcripts-like prote... 102 4e-20 emb|CBI22565.3| unnamed protein product [Vitis vinifera] 102 4e-20 ref|XP_003552892.1| PREDICTED: uncharacterized protein LOC100820... 101 7e-20 >ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago truncatula] gi|355489654|gb|AES70857.1| DNA polymerase alpha-associated DNA helicase A [Medicago truncatula] Length = 950 Score = 107 bits (268), Expect = 8e-22 Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 3/94 (3%) Frame = +2 Query: 2 LNADSKVGERCDVCSFQEIHV---LRQDLNVNFRSMNLNESQMDAVLSSIETRQCKHRNS 172 L ADS GE C +C + E H+ ++ +S NLNESQ DAVLSS+ R+C H ++ Sbjct: 219 LQADSNNGENCQLCIYGENHIDIAACSKVHTMIQSENLNESQKDAVLSSVSMRECHHSDT 278 Query: 173 LRLIWGPPGTGKTKTVATLLWALLRMKCRTLTCA 274 ++LIWGPPGTGKTKTVA+LL++LL+ K RTLTCA Sbjct: 279 IKLIWGPPGTGKTKTVASLLFSLLKFKARTLTCA 312 >ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244982 [Vitis vinifera] Length = 1076 Score = 102 bits (253), Expect = 4e-20 Identities = 51/91 (56%), Positives = 62/91 (68%) Frame = +2 Query: 2 LNADSKVGERCDVCSFQEIHVLRQDLNVNFRSMNLNESQMDAVLSSIETRQCKHRNSLRL 181 L DS GE C +CS + + S +LN+SQ AVLS I R+C H+NS++ Sbjct: 249 LQPDSLAGEECALCSSDSV----SNSEPMVSSFDLNDSQKAAVLSCIAARECHHQNSIKQ 304 Query: 182 IWGPPGTGKTKTVATLLWALLRMKCRTLTCA 274 IWGPPGTGKTKTVATLL+AL RMKCRT+TCA Sbjct: 305 IWGPPGTGKTKTVATLLFALYRMKCRTVTCA 335 >ref|XP_003600608.1| Regulator of nonsense transcripts-like protein [Medicago truncatula] gi|355489656|gb|AES70859.1| Regulator of nonsense transcripts-like protein [Medicago truncatula] Length = 897 Score = 102 bits (253), Expect = 4e-20 Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 1/92 (1%) Frame = +2 Query: 2 LNADSKVGERCDVCSFQEIHVLRQD-LNVNFRSMNLNESQMDAVLSSIETRQCKHRNSLR 178 L DS VGE C C E H + L RS +LN++Q + VLS I R+C H+N+++ Sbjct: 218 LQPDSGVGENCAQCFSSERHSIDTSRLGAVIRSFDLNDAQEEGVLSCIAARECSHKNTVK 277 Query: 179 LIWGPPGTGKTKTVATLLWALLRMKCRTLTCA 274 LIWGPPGTGKTKT ++LL+ALL+ +CRTLTCA Sbjct: 278 LIWGPPGTGKTKTASSLLFALLKRRCRTLTCA 309 >emb|CBI22565.3| unnamed protein product [Vitis vinifera] Length = 960 Score = 102 bits (253), Expect = 4e-20 Identities = 51/91 (56%), Positives = 62/91 (68%) Frame = +2 Query: 2 LNADSKVGERCDVCSFQEIHVLRQDLNVNFRSMNLNESQMDAVLSSIETRQCKHRNSLRL 181 L DS GE C +CS + + S +LN+SQ AVLS I R+C H+NS++ Sbjct: 213 LQPDSLAGEECALCSSDSV----SNSEPMVSSFDLNDSQKAAVLSCIAARECHHQNSIKQ 268 Query: 182 IWGPPGTGKTKTVATLLWALLRMKCRTLTCA 274 IWGPPGTGKTKTVATLL+AL RMKCRT+TCA Sbjct: 269 IWGPPGTGKTKTVATLLFALYRMKCRTVTCA 299 >ref|XP_003552892.1| PREDICTED: uncharacterized protein LOC100820164 [Glycine max] Length = 1054 Score = 101 bits (251), Expect = 7e-20 Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 1/92 (1%) Frame = +2 Query: 2 LNADSKVGERCDVC-SFQEIHVLRQDLNVNFRSMNLNESQMDAVLSSIETRQCKHRNSLR 178 L DS VGE C C SFQ + R +LN++Q + VLS + R+C H+N+++ Sbjct: 206 LQPDSAVGENCAQCYSFQRYTDDGSMIGAAIRLFDLNKAQEEGVLSCLAARECSHKNTVK 265 Query: 179 LIWGPPGTGKTKTVATLLWALLRMKCRTLTCA 274 LIWGPPGTGKTKTVA+LL+ALL+ KCRTLTCA Sbjct: 266 LIWGPPGTGKTKTVASLLFALLKKKCRTLTCA 297