BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039729
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]    92   6e-17
emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]    91   1e-16
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      83   2e-14
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]    82   5e-14
gb|ABA93547.1| retrotransposon protein, putative, Ty1-copia subc...    82   6e-14

>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/124 (40%), Positives = 68/124 (54%)
 Frame = -3

Query: 373 DAGQGLFIRGRSHEKASTSNERSRSKSKKPLKYVKCYNCNEKGHYANNCPHPXXXXXXXX 194
           D+G+GL  RGR+ +K +    RSRSKS+   K   C+ C ++GHY  N P          
Sbjct: 149 DSGEGLVARGRTRKKNNGRRGRSRSKSRGNNK---CFKCKKEGHYVKNXPDRKGKENKRN 205

Query: 193 XXKVHIEASYASGSEKEDEVSLCVSTQEFMADRWILDTGCSYHMCPNRKWFTSYESIDGG 14
                 +A++A  +    +V L   T     D WILD+GCSYHM PN  WF++Y+ IDGG
Sbjct: 206 YNSG--DATFAKENSNTTDVLLVXVTNS--DDEWILDSGCSYHMSPNGDWFSTYQPIDGG 261

Query: 13  SVLM 2
            VLM
Sbjct: 262 KVLM 265


>emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]
          Length = 347

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
 Frame = -3

Query: 400 KKTRIESSIDAGQGLFI-----RGRSHEKASTSNERSRSKSKKPLKYVKCYNCNEKGHYA 236
           KK   ESS   G+ L +     RGR+  ++ +SN +SRSKSKK  K ++CY C +KGH  
Sbjct: 77  KKANDESS--QGERLMVKSNQERGRNKFRSESSNNKSRSKSKKR-KDIQCYKCGKKGHMK 133

Query: 235 NNCPHPXXXXXXXXXXKVHIEASYA---SGSEKEDEVSLCVSTQ-EFMADRWILDTGCSY 68
            +CP            +   +++       SE  D   L VS+  + + D WILD+ CSY
Sbjct: 134 RDCPEKKKRGSVSENKEGSSKSANVVTEEDSESGDGDMLSVSSSSDHLTDSWILDSTCSY 193

Query: 67  HMCPNRKWFTSYESIDGGSVLM 2
           HM PN+ WF +Y S++ GS+LM
Sbjct: 194 HMTPNKDWFNTYRSVNSGSILM 215


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 50/148 (33%), Positives = 67/148 (45%), Gaps = 20/148 (13%)
 Frame = -3

Query: 385 ESSIDAGQGLFIRGRSHEKASTSNERSRS------KSKKPLKYVKCYNCNEKGHYANNCP 224
           E S    +GL +RGR  EK + +  R +S      +SK   +Y  C  C   GH  + C 
Sbjct: 100 EGSNSQAEGLVVRGRQQEKNTNNKSRDKSSSIYRGRSKSRGRYKSCKYCKRDGHDISEC- 158

Query: 223 HPXXXXXXXXXXKVHIEASYASGSEKEDEVSLCVSTQEFM--------------ADRWIL 86
                       K      Y    +KE+E    V T E                +D+WIL
Sbjct: 159 -------WKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWIL 211

Query: 85  DTGCSYHMCPNRKWFTSYESIDGGSVLM 2
           DT C+YHMCPNR WF +YE++ GG+VLM
Sbjct: 212 DTACTYHMCPNRDWFATYEAVQGGTVLM 239


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/128 (32%), Positives = 64/128 (50%)
 Frame = -3

Query: 385 ESSIDAGQGLFIRGRSHEKASTSNERSRSKSKKPLKYVKCYNCNEKGHYANNCPHPXXXX 206
           ES  + G+GL IRG+S ++       S+S+SK   K  KC+ C+++GH+  +CP      
Sbjct: 189 ESKEELGEGLNIRGKSKKREKKKGNNSKSRSKSKTKKFKCFICHKEGHFKKDCPDMRQNT 248

Query: 205 XXXXXXKVHIEASYASGSEKEDEVSLCVSTQEFMADRWILDTGCSYHMCPNRKWFTSYES 26
                     E       +  D   +    +      WILD+GCS+HMCP + WF  ++ 
Sbjct: 249 XKKTMN----EGDATMILDGYDNAGVLNVAEVDSGKEWILDSGCSFHMCPIKAWFEDFKE 304

Query: 25  IDGGSVLM 2
            +GG VL+
Sbjct: 305 ANGGHVLL 312


>gb|ABA93547.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 546

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 50/148 (33%), Positives = 67/148 (45%), Gaps = 20/148 (13%)
 Frame = -3

Query: 385 ESSIDAGQGLFIRGRSHEKASTSNERSRS------KSKKPLKYVKCYNCNEKGHYANNCP 224
           E S    +GL +RGR  EK + +  R +S      +SK   +Y  C  C   GH  + C 
Sbjct: 8   EGSNSQAEGLVVRGRQLEKNTKNQSRDKSSSSYRGRSKSRGRYRSCKYCKRDGHDISEC- 66

Query: 223 HPXXXXXXXXXXKVHIEASYASGSEKEDEVSLCVSTQEFM--------------ADRWIL 86
                       K      Y    +KE+E    V T E                +D+WIL
Sbjct: 67  -------WKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWIL 119

Query: 85  DTGCSYHMCPNRKWFTSYESIDGGSVLM 2
           DT C+YHMCPNR WF +YE++ GG+VLM
Sbjct: 120 DTACTYHMCPNRDWFVTYEAVQGGTVLM 147