BLASTX nr result
ID: Coptis21_contig00039729
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039729 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 92 6e-17 emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera] 91 1e-16 gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 83 2e-14 emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera] 82 5e-14 gb|ABA93547.1| retrotransposon protein, putative, Ty1-copia subc... 82 6e-14 >emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] Length = 344 Score = 91.7 bits (226), Expect = 6e-17 Identities = 50/124 (40%), Positives = 68/124 (54%) Frame = -3 Query: 373 DAGQGLFIRGRSHEKASTSNERSRSKSKKPLKYVKCYNCNEKGHYANNCPHPXXXXXXXX 194 D+G+GL RGR+ +K + RSRSKS+ K C+ C ++GHY N P Sbjct: 149 DSGEGLVARGRTRKKNNGRRGRSRSKSRGNNK---CFKCKKEGHYVKNXPDRKGKENKRN 205 Query: 193 XXKVHIEASYASGSEKEDEVSLCVSTQEFMADRWILDTGCSYHMCPNRKWFTSYESIDGG 14 +A++A + +V L T D WILD+GCSYHM PN WF++Y+ IDGG Sbjct: 206 YNSG--DATFAKENSNTTDVLLVXVTNS--DDEWILDSGCSYHMSPNGDWFSTYQPIDGG 261 Query: 13 SVLM 2 VLM Sbjct: 262 KVLM 265 >emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera] Length = 347 Score = 90.9 bits (224), Expect = 1e-16 Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 9/142 (6%) Frame = -3 Query: 400 KKTRIESSIDAGQGLFI-----RGRSHEKASTSNERSRSKSKKPLKYVKCYNCNEKGHYA 236 KK ESS G+ L + RGR+ ++ +SN +SRSKSKK K ++CY C +KGH Sbjct: 77 KKANDESS--QGERLMVKSNQERGRNKFRSESSNNKSRSKSKKR-KDIQCYKCGKKGHMK 133 Query: 235 NNCPHPXXXXXXXXXXKVHIEASYA---SGSEKEDEVSLCVSTQ-EFMADRWILDTGCSY 68 +CP + +++ SE D L VS+ + + D WILD+ CSY Sbjct: 134 RDCPEKKKRGSVSENKEGSSKSANVVTEEDSESGDGDMLSVSSSSDHLTDSWILDSTCSY 193 Query: 67 HMCPNRKWFTSYESIDGGSVLM 2 HM PN+ WF +Y S++ GS+LM Sbjct: 194 HMTPNKDWFNTYRSVNSGSILM 215 >gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1241 Score = 83.2 bits (204), Expect = 2e-14 Identities = 50/148 (33%), Positives = 67/148 (45%), Gaps = 20/148 (13%) Frame = -3 Query: 385 ESSIDAGQGLFIRGRSHEKASTSNERSRS------KSKKPLKYVKCYNCNEKGHYANNCP 224 E S +GL +RGR EK + + R +S +SK +Y C C GH + C Sbjct: 100 EGSNSQAEGLVVRGRQQEKNTNNKSRDKSSSIYRGRSKSRGRYKSCKYCKRDGHDISEC- 158 Query: 223 HPXXXXXXXXXXKVHIEASYASGSEKEDEVSLCVSTQEFM--------------ADRWIL 86 K Y +KE+E V T E +D+WIL Sbjct: 159 -------WKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWIL 211 Query: 85 DTGCSYHMCPNRKWFTSYESIDGGSVLM 2 DT C+YHMCPNR WF +YE++ GG+VLM Sbjct: 212 DTACTYHMCPNRDWFATYEAVQGGTVLM 239 >emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera] Length = 894 Score = 82.0 bits (201), Expect = 5e-14 Identities = 41/128 (32%), Positives = 64/128 (50%) Frame = -3 Query: 385 ESSIDAGQGLFIRGRSHEKASTSNERSRSKSKKPLKYVKCYNCNEKGHYANNCPHPXXXX 206 ES + G+GL IRG+S ++ S+S+SK K KC+ C+++GH+ +CP Sbjct: 189 ESKEELGEGLNIRGKSKKREKKKGNNSKSRSKSKTKKFKCFICHKEGHFKKDCPDMRQNT 248 Query: 205 XXXXXXKVHIEASYASGSEKEDEVSLCVSTQEFMADRWILDTGCSYHMCPNRKWFTSYES 26 E + D + + WILD+GCS+HMCP + WF ++ Sbjct: 249 XKKTMN----EGDATMILDGYDNAGVLNVAEVDSGKEWILDSGCSFHMCPIKAWFEDFKE 304 Query: 25 IDGGSVLM 2 +GG VL+ Sbjct: 305 ANGGHVLL 312 >gb|ABA93547.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 546 Score = 81.6 bits (200), Expect = 6e-14 Identities = 50/148 (33%), Positives = 67/148 (45%), Gaps = 20/148 (13%) Frame = -3 Query: 385 ESSIDAGQGLFIRGRSHEKASTSNERSRS------KSKKPLKYVKCYNCNEKGHYANNCP 224 E S +GL +RGR EK + + R +S +SK +Y C C GH + C Sbjct: 8 EGSNSQAEGLVVRGRQLEKNTKNQSRDKSSSSYRGRSKSRGRYRSCKYCKRDGHDISEC- 66 Query: 223 HPXXXXXXXXXXKVHIEASYASGSEKEDEVSLCVSTQEFM--------------ADRWIL 86 K Y +KE+E V T E +D+WIL Sbjct: 67 -------WKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWIL 119 Query: 85 DTGCSYHMCPNRKWFTSYESIDGGSVLM 2 DT C+YHMCPNR WF +YE++ GG+VLM Sbjct: 120 DTACTYHMCPNRDWFVTYEAVQGGTVLM 147