BLASTX nr result
ID: Coptis21_contig00039726
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039726 (254 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AGA20432.1| coat protein, partial [Rose yellow vein virus] gi... 63 3e-08 gb|AFO54490.1| capsid protein [Rose yellow vein virus] 63 3e-08 >gb|AGA20432.1| coat protein, partial [Rose yellow vein virus] gi|430007893|gb|AGA20433.1| coat protein, partial [Rose yellow vein virus] Length = 221 Score = 62.8 bits (151), Expect = 3e-08 Identities = 31/75 (41%), Positives = 46/75 (61%) Frame = -2 Query: 253 GPLTGAYLRLQICGTTGTKEEKYKLRQDAWLMLQKIECCKMSSIEEYSETFLRLFLIYGD 74 G + LRL+ICG T EEK KL++ A +LQ + C +S +++Y+ F +L+ I G+ Sbjct: 147 GKFITSTLRLEICGIESTDEEKLKLQEKAKHLLQTLRLCDISMLDKYNVIFTKLYWIAGE 206 Query: 73 LRNEALLRLYFSKLP 29 + N L YFSKLP Sbjct: 207 VTNLETLNSYFSKLP 221 >gb|AFO54490.1| capsid protein [Rose yellow vein virus] Length = 498 Score = 62.8 bits (151), Expect = 3e-08 Identities = 31/75 (41%), Positives = 46/75 (61%) Frame = -2 Query: 253 GPLTGAYLRLQICGTTGTKEEKYKLRQDAWLMLQKIECCKMSSIEEYSETFLRLFLIYGD 74 G + LRL+ICG T EEK KL++ A +LQ + C +S +++Y+ F +L+ I G+ Sbjct: 244 GKFITSTLRLEICGIESTDEEKLKLQEKAKHLLQTLRLCDISMLDKYNVIFTKLYWIAGE 303 Query: 73 LRNEALLRLYFSKLP 29 + N L YFSKLP Sbjct: 304 VTNLETLNSYFSKLP 318