BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039707
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001045123.1| Os01g0904400 [Oryza sativa Japonica Group] g...    63   3e-20
emb|CAD59410.1| SMC2 protein [Oryza sativa]                            63   3e-20
gb|EEC71984.1| hypothetical protein OsI_04829 [Oryza sativa Indi...    63   3e-20
ref|XP_002304405.1| condensin complex components subunit [Populu...    64   5e-20
ref|XP_003564866.1| PREDICTED: structural maintenance of chromos...    65   1e-19

>ref|NP_001045123.1| Os01g0904400 [Oryza sativa Japonica Group]
           gi|56784538|dbj|BAD82795.1| SMC2 protein [Oryza sativa
           Japonica Group] gi|113534654|dbj|BAF07037.1|
           Os01g0904400 [Oryza sativa Japonica Group]
          Length = 1175

 Score = 63.2 bits (152), Expect(2) = 3e-20
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = -2

Query: 396 KVSLTSVPYEEGQLEALQKDCEAESKVVEKLTDEVRSLSGELRNVKFRYR 247
           K S+ SV YEEGQ+EALQKD   E   V+KL D++R+LSGEL NV F YR
Sbjct: 460 KASMQSVNYEEGQMEALQKDRSIELDAVQKLKDKIRALSGELANVHFNYR 509



 Score = 60.1 bits (144), Expect(2) = 3e-20
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -3

Query: 245 RDPVDNFDRSKVKGVVAKLIKVKDSSTTTALEV 147
           RDPV NFDRSKVKGVVA+LIK+KDSST TALEV
Sbjct: 509 RDPVKNFDRSKVKGVVARLIKIKDSSTATALEV 541


>emb|CAD59410.1| SMC2 protein [Oryza sativa]
          Length = 1175

 Score = 63.2 bits (152), Expect(2) = 3e-20
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = -2

Query: 396 KVSLTSVPYEEGQLEALQKDCEAESKVVEKLTDEVRSLSGELRNVKFRYR 247
           K S+ SV YEEGQ+EALQKD   E   V+KL D++R+LSGEL NV F YR
Sbjct: 460 KASMQSVNYEEGQMEALQKDRSIELDAVQKLKDKIRALSGELANVHFNYR 509



 Score = 60.1 bits (144), Expect(2) = 3e-20
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -3

Query: 245 RDPVDNFDRSKVKGVVAKLIKVKDSSTTTALEV 147
           RDPV NFDRSKVKGVVA+LIK+KDSST TALEV
Sbjct: 509 RDPVKNFDRSKVKGVVARLIKIKDSSTATALEV 541


>gb|EEC71984.1| hypothetical protein OsI_04829 [Oryza sativa Indica Group]
          Length = 1171

 Score = 63.2 bits (152), Expect(2) = 3e-20
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = -2

Query: 396 KVSLTSVPYEEGQLEALQKDCEAESKVVEKLTDEVRSLSGELRNVKFRYR 247
           K S+ SV YEEGQ+EALQKD   E   V+KL D++R+LSGEL NV F YR
Sbjct: 460 KASMQSVNYEEGQMEALQKDRSIELDAVQKLKDKIRALSGELANVHFNYR 509



 Score = 60.1 bits (144), Expect(2) = 3e-20
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -3

Query: 245 RDPVDNFDRSKVKGVVAKLIKVKDSSTTTALEV 147
           RDPV NFDRSKVKGVVA+LIK+KDSST TALEV
Sbjct: 509 RDPVKNFDRSKVKGVVARLIKIKDSSTATALEV 541


>ref|XP_002304405.1| condensin complex components subunit [Populus trichocarpa]
           gi|222841837|gb|EEE79384.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1176

 Score = 63.5 bits (153), Expect(2) = 5e-20
 Identities = 29/50 (58%), Positives = 40/50 (80%)
 Frame = -2

Query: 396 KVSLTSVPYEEGQLEALQKDCEAESKVVEKLTDEVRSLSGELRNVKFRYR 247
           K +L S+ Y+EGQ+EALQKDC +E K+++KL DE+R LS +L NV+F YR
Sbjct: 460 KSALESLSYKEGQMEALQKDCASELKLLQKLKDEIRDLSAQLSNVQFIYR 509



 Score = 58.9 bits (141), Expect(2) = 5e-20
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = -3

Query: 245 RDPVDNFDRSKVKGVVAKLIKVKDSSTTTALEV 147
           RDPV NFDRSKVKGVVAKLIKV DSST TALEV
Sbjct: 509 RDPVRNFDRSKVKGVVAKLIKVNDSSTMTALEV 541


>ref|XP_003564866.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
           [Brachypodium distachyon]
          Length = 1175

 Score = 64.7 bits (156), Expect(2) = 1e-19
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = -2

Query: 396 KVSLTSVPYEEGQLEALQKDCEAESKVVEKLTDEVRSLSGELRNVKFRYR 247
           K S+ S+ YEEGQ+EALQKD   E  VV+KL D+VR+LSGEL NV F YR
Sbjct: 460 KASMGSIDYEEGQMEALQKDRSTELDVVQKLKDKVRALSGELANVHFSYR 509



 Score = 56.6 bits (135), Expect(2) = 1e-19
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = -3

Query: 245 RDPVDNFDRSKVKGVVAKLIKVKDSSTTTALEV 147
           RDPV +FDRSKVKGVVA+LIK+KDS+T TALEV
Sbjct: 509 RDPVRSFDRSKVKGVVARLIKIKDSTTATALEV 541