BLASTX nr result
ID: Coptis21_contig00039707
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039707 (397 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001045123.1| Os01g0904400 [Oryza sativa Japonica Group] g... 63 3e-20 emb|CAD59410.1| SMC2 protein [Oryza sativa] 63 3e-20 gb|EEC71984.1| hypothetical protein OsI_04829 [Oryza sativa Indi... 63 3e-20 ref|XP_002304405.1| condensin complex components subunit [Populu... 64 5e-20 ref|XP_003564866.1| PREDICTED: structural maintenance of chromos... 65 1e-19 >ref|NP_001045123.1| Os01g0904400 [Oryza sativa Japonica Group] gi|56784538|dbj|BAD82795.1| SMC2 protein [Oryza sativa Japonica Group] gi|113534654|dbj|BAF07037.1| Os01g0904400 [Oryza sativa Japonica Group] Length = 1175 Score = 63.2 bits (152), Expect(2) = 3e-20 Identities = 31/50 (62%), Positives = 37/50 (74%) Frame = -2 Query: 396 KVSLTSVPYEEGQLEALQKDCEAESKVVEKLTDEVRSLSGELRNVKFRYR 247 K S+ SV YEEGQ+EALQKD E V+KL D++R+LSGEL NV F YR Sbjct: 460 KASMQSVNYEEGQMEALQKDRSIELDAVQKLKDKIRALSGELANVHFNYR 509 Score = 60.1 bits (144), Expect(2) = 3e-20 Identities = 29/33 (87%), Positives = 31/33 (93%) Frame = -3 Query: 245 RDPVDNFDRSKVKGVVAKLIKVKDSSTTTALEV 147 RDPV NFDRSKVKGVVA+LIK+KDSST TALEV Sbjct: 509 RDPVKNFDRSKVKGVVARLIKIKDSSTATALEV 541 >emb|CAD59410.1| SMC2 protein [Oryza sativa] Length = 1175 Score = 63.2 bits (152), Expect(2) = 3e-20 Identities = 31/50 (62%), Positives = 37/50 (74%) Frame = -2 Query: 396 KVSLTSVPYEEGQLEALQKDCEAESKVVEKLTDEVRSLSGELRNVKFRYR 247 K S+ SV YEEGQ+EALQKD E V+KL D++R+LSGEL NV F YR Sbjct: 460 KASMQSVNYEEGQMEALQKDRSIELDAVQKLKDKIRALSGELANVHFNYR 509 Score = 60.1 bits (144), Expect(2) = 3e-20 Identities = 29/33 (87%), Positives = 31/33 (93%) Frame = -3 Query: 245 RDPVDNFDRSKVKGVVAKLIKVKDSSTTTALEV 147 RDPV NFDRSKVKGVVA+LIK+KDSST TALEV Sbjct: 509 RDPVKNFDRSKVKGVVARLIKIKDSSTATALEV 541 >gb|EEC71984.1| hypothetical protein OsI_04829 [Oryza sativa Indica Group] Length = 1171 Score = 63.2 bits (152), Expect(2) = 3e-20 Identities = 31/50 (62%), Positives = 37/50 (74%) Frame = -2 Query: 396 KVSLTSVPYEEGQLEALQKDCEAESKVVEKLTDEVRSLSGELRNVKFRYR 247 K S+ SV YEEGQ+EALQKD E V+KL D++R+LSGEL NV F YR Sbjct: 460 KASMQSVNYEEGQMEALQKDRSIELDAVQKLKDKIRALSGELANVHFNYR 509 Score = 60.1 bits (144), Expect(2) = 3e-20 Identities = 29/33 (87%), Positives = 31/33 (93%) Frame = -3 Query: 245 RDPVDNFDRSKVKGVVAKLIKVKDSSTTTALEV 147 RDPV NFDRSKVKGVVA+LIK+KDSST TALEV Sbjct: 509 RDPVKNFDRSKVKGVVARLIKIKDSSTATALEV 541 >ref|XP_002304405.1| condensin complex components subunit [Populus trichocarpa] gi|222841837|gb|EEE79384.1| condensin complex components subunit [Populus trichocarpa] Length = 1176 Score = 63.5 bits (153), Expect(2) = 5e-20 Identities = 29/50 (58%), Positives = 40/50 (80%) Frame = -2 Query: 396 KVSLTSVPYEEGQLEALQKDCEAESKVVEKLTDEVRSLSGELRNVKFRYR 247 K +L S+ Y+EGQ+EALQKDC +E K+++KL DE+R LS +L NV+F YR Sbjct: 460 KSALESLSYKEGQMEALQKDCASELKLLQKLKDEIRDLSAQLSNVQFIYR 509 Score = 58.9 bits (141), Expect(2) = 5e-20 Identities = 30/33 (90%), Positives = 30/33 (90%) Frame = -3 Query: 245 RDPVDNFDRSKVKGVVAKLIKVKDSSTTTALEV 147 RDPV NFDRSKVKGVVAKLIKV DSST TALEV Sbjct: 509 RDPVRNFDRSKVKGVVAKLIKVNDSSTMTALEV 541 >ref|XP_003564866.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like [Brachypodium distachyon] Length = 1175 Score = 64.7 bits (156), Expect(2) = 1e-19 Identities = 32/50 (64%), Positives = 38/50 (76%) Frame = -2 Query: 396 KVSLTSVPYEEGQLEALQKDCEAESKVVEKLTDEVRSLSGELRNVKFRYR 247 K S+ S+ YEEGQ+EALQKD E VV+KL D+VR+LSGEL NV F YR Sbjct: 460 KASMGSIDYEEGQMEALQKDRSTELDVVQKLKDKVRALSGELANVHFSYR 509 Score = 56.6 bits (135), Expect(2) = 1e-19 Identities = 27/33 (81%), Positives = 31/33 (93%) Frame = -3 Query: 245 RDPVDNFDRSKVKGVVAKLIKVKDSSTTTALEV 147 RDPV +FDRSKVKGVVA+LIK+KDS+T TALEV Sbjct: 509 RDPVRSFDRSKVKGVVARLIKIKDSTTATALEV 541