BLASTX nr result

ID: Coptis21_contig00039698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039698
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P93306.2|NDUS2_ARATH RecName: Full=NADH dehydrogenase [ubiqui...   211   2e-52
ref|YP_717100.1| NADH dehydrogenase subunit 7 [Brassica napus] g...   208   1e-51
gb|AFK43004.1| unknown [Lotus japonicus] gi|388517563|gb|AFK4684...   208   1e-51
ref|YP_005090473.1| NADH dehydrogenase subunit 7 (mitochondrion)...   208   1e-51
gb|ACH78248.1| NADH dehydrogenase subunit 7 [Arabidopsis thaliana]    208   1e-51

>sp|P93306.2|NDUS2_ARATH RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
           2; AltName: Full=NADH dehydrogenase subunit 7
          Length = 394

 Score =  211 bits (536), Expect = 2e-52
 Identities = 102/104 (98%), Positives = 102/104 (98%)
 Frame = +2

Query: 2   DRKLXPPSRCRMKLSMESSIHHFELYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRP 181
           DRKL PPSRCRMKLSMESSIHHFELYTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNRP
Sbjct: 291 DRKLCPPSRCRMKLSMESSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRP 350

Query: 182 YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 313
           YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR
Sbjct: 351 YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 394


>ref|YP_717100.1| NADH dehydrogenase subunit 7 [Brassica napus]
           gi|37591046|dbj|BAC98848.1| NADH dehydrogenase subunit 7
           [Brassica napus]
          Length = 394

 Score =  208 bits (530), Expect = 1e-51
 Identities = 101/104 (97%), Positives = 101/104 (97%)
 Frame = +2

Query: 2   DRKLXPPSRCRMKLSMESSIHHFELYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRP 181
           DRKL PPSRCRMKLSMES IHHFELYTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNRP
Sbjct: 291 DRKLCPPSRCRMKLSMESLIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRP 350

Query: 182 YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 313
           YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR
Sbjct: 351 YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 394


>gb|AFK43004.1| unknown [Lotus japonicus] gi|388517563|gb|AFK46843.1| unknown
           [Lotus japonicus]
          Length = 320

 Score =  208 bits (530), Expect = 1e-51
 Identities = 101/104 (97%), Positives = 101/104 (97%)
 Frame = +2

Query: 2   DRKLXPPSRCRMKLSMESSIHHFELYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRP 181
           DRKL PPSRCRMKLSMES IHHFELYTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNRP
Sbjct: 217 DRKLCPPSRCRMKLSMESLIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRP 276

Query: 182 YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 313
           YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR
Sbjct: 277 YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 320


>ref|YP_005090473.1| NADH dehydrogenase subunit 7 (mitochondrion) [Lotus japonicus]
           gi|357197337|gb|AET62933.1| NADH dehydrogenase subunit 7
           (mitochondrion) [Lotus japonicus]
          Length = 394

 Score =  208 bits (530), Expect = 1e-51
 Identities = 101/104 (97%), Positives = 101/104 (97%)
 Frame = +2

Query: 2   DRKLXPPSRCRMKLSMESSIHHFELYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRP 181
           DRKL PPSRCRMKLSMES IHHFELYTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNRP
Sbjct: 291 DRKLCPPSRCRMKLSMESLIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRP 350

Query: 182 YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 313
           YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR
Sbjct: 351 YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 394


>gb|ACH78248.1| NADH dehydrogenase subunit 7 [Arabidopsis thaliana]
          Length = 394

 Score =  208 bits (530), Expect = 1e-51
 Identities = 101/104 (97%), Positives = 101/104 (97%)
 Frame = +2

Query: 2   DRKLXPPSRCRMKLSMESSIHHFELYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRP 181
           DRKL PPSRCRMKLSMES IHHFELYTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNRP
Sbjct: 291 DRKLCPPSRCRMKLSMESLIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRP 350

Query: 182 YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 313
           YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR
Sbjct: 351 YRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 394


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