BLASTX nr result

ID: Coptis21_contig00039670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039670
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270442.2| PREDICTED: mitochondrial substrate carrier f...   127   1e-27
ref|XP_002320376.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_004158923.1| PREDICTED: mitochondrial substrate carrier f...   118   6e-25
ref|XP_004148885.1| PREDICTED: mitochondrial substrate carrier f...   118   6e-25
ref|NP_680566.5| Mitochondrial substrate carrier family protein ...   116   2e-24

>ref|XP_002270442.2| PREDICTED: mitochondrial substrate carrier family protein ucpB-like
           [Vitis vinifera] gi|296086640|emb|CBI32275.3| unnamed
           protein product [Vitis vinifera]
          Length = 311

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/76 (76%), Positives = 68/76 (89%)
 Frame = -2

Query: 228 KRALLRLTPLEEGFHLHFISSTIAGTVSTLVTAPMDMIKTRLMMQKESKTTGSYKNGFHC 49
           K+ L+R TPLEEGFHLH ISST+AG +STL+TAPMDMIKTRLM+Q+ESK  G+YKNGFHC
Sbjct: 205 KQILMRWTPLEEGFHLHLISSTVAGGLSTLITAPMDMIKTRLMLQRESKVAGNYKNGFHC 264

Query: 48  GYKVMLTEGPLALYKG 1
            Y+V+LTEGP ALYKG
Sbjct: 265 AYQVILTEGPRALYKG 280


>ref|XP_002320376.1| predicted protein [Populus trichocarpa] gi|222861149|gb|EEE98691.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/76 (76%), Positives = 67/76 (88%)
 Frame = -2

Query: 228 KRALLRLTPLEEGFHLHFISSTIAGTVSTLVTAPMDMIKTRLMMQKESKTTGSYKNGFHC 49
           K+ L+R TPL+EGFHLH +  T+AGTVSTLVTAPMDMIKTRLM+Q+ESKT G+YKNGFHC
Sbjct: 180 KQVLIRWTPLDEGFHLHLL--TVAGTVSTLVTAPMDMIKTRLMLQRESKTVGNYKNGFHC 237

Query: 48  GYKVMLTEGPLALYKG 1
            Y+VML EGP ALYKG
Sbjct: 238 AYQVMLKEGPRALYKG 253


>ref|XP_004158923.1| PREDICTED: mitochondrial substrate carrier family protein ucpB-like
           [Cucumis sativus]
          Length = 314

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/76 (69%), Positives = 66/76 (86%)
 Frame = -2

Query: 228 KRALLRLTPLEEGFHLHFISSTIAGTVSTLVTAPMDMIKTRLMMQKESKTTGSYKNGFHC 49
           K+ L++ TPL+EGF LH ISST+AG VSTL+T P+DMIKTRLM+Q+ESK  G+YKNG HC
Sbjct: 208 KQLLVKWTPLQEGFSLHLISSTVAGVVSTLMTTPIDMIKTRLMLQRESKRVGNYKNGLHC 267

Query: 48  GYKVMLTEGPLALYKG 1
            Y+++LTEGPLALYKG
Sbjct: 268 AYQIVLTEGPLALYKG 283


>ref|XP_004148885.1| PREDICTED: mitochondrial substrate carrier family protein ucpB-like
           [Cucumis sativus]
          Length = 317

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/76 (69%), Positives = 66/76 (86%)
 Frame = -2

Query: 228 KRALLRLTPLEEGFHLHFISSTIAGTVSTLVTAPMDMIKTRLMMQKESKTTGSYKNGFHC 49
           K+ L++ TPL+EGF LH ISST+AG VSTL+T P+DMIKTRLM+Q+ESK  G+YKNG HC
Sbjct: 208 KQLLVKWTPLQEGFSLHLISSTVAGVVSTLMTTPIDMIKTRLMLQRESKRVGNYKNGLHC 267

Query: 48  GYKVMLTEGPLALYKG 1
            Y+++LTEGPLALYKG
Sbjct: 268 AYQIVLTEGPLALYKG 283


>ref|NP_680566.5| Mitochondrial substrate carrier family protein [Arabidopsis
           thaliana] gi|332656874|gb|AEE82274.1| Mitochondrial
           substrate carrier family protein [Arabidopsis thaliana]
          Length = 314

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/76 (71%), Positives = 65/76 (85%)
 Frame = -2

Query: 228 KRALLRLTPLEEGFHLHFISSTIAGTVSTLVTAPMDMIKTRLMMQKESKTTGSYKNGFHC 49
           KR L++ T LEEGFHLH  SS +AG VSTL+TAPMDMIKTRLM+Q+ S++T +Y+NGFHC
Sbjct: 208 KRILVKRTSLEEGFHLHLCSSVVAGLVSTLITAPMDMIKTRLMLQQGSESTKTYRNGFHC 267

Query: 48  GYKVMLTEGPLALYKG 1
           GYKV+  EGPLALYKG
Sbjct: 268 GYKVVRKEGPLALYKG 283


Top