BLASTX nr result
ID: Coptis21_contig00039668
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039668 (338 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2... 61 8e-08 ref|XP_002533477.1| conserved hypothetical protein [Ricinus comm... 59 5e-07 >ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1| predicted protein [Populus trichocarpa] Length = 477 Score = 61.2 bits (147), Expect = 8e-08 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%) Frame = -1 Query: 299 LYLSALGGCLSLIHIVSNEHIEIWVMKEYGMQSSWVKEYTISNVMDNYDFEITGPYKPIE 120 + L LGGCL + +IWVMK+YG+Q SW KE+ + N + + Y+PI Sbjct: 279 MMLGVLGGCLYFFDYPLGDSFDIWVMKQYGVQESWTKEFILKNPSTDIIW-YWDLYRPIS 337 Query: 119 LLKDGVIL--HSSGHVLGYNGPDNIF 48 LL +G IL H S ++ YN D F Sbjct: 338 LLSNGEILMSHKSKAMVSYNPEDRSF 363 >ref|XP_002533477.1| conserved hypothetical protein [Ricinus communis] gi|223526670|gb|EEF28909.1| conserved hypothetical protein [Ricinus communis] Length = 83 Score = 58.5 bits (140), Expect = 5e-07 Identities = 23/56 (41%), Positives = 42/56 (75%), Gaps = 1/56 (1%) Frame = -1 Query: 308 NFCLYLSALGGCLSLIH-IVSNEHIEIWVMKEYGMQSSWVKEYTISNVMDNYDFEI 144 N+C+ LS LGGCL + + + + +H++IW++KEYG++ SW K ++I ++DN F++ Sbjct: 3 NYCM-LSELGGCLCMSNNVFAYDHVDIWIVKEYGVEESWTKSFSIPKLLDNVLFDL 57