BLASTX nr result

ID: Coptis21_contig00039668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039668
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002533477.1| conserved hypothetical protein [Ricinus comm...    59   5e-07

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
 Frame = -1

Query: 299 LYLSALGGCLSLIHIVSNEHIEIWVMKEYGMQSSWVKEYTISNVMDNYDFEITGPYKPIE 120
           + L  LGGCL        +  +IWVMK+YG+Q SW KE+ + N   +  +     Y+PI 
Sbjct: 279 MMLGVLGGCLYFFDYPLGDSFDIWVMKQYGVQESWTKEFILKNPSTDIIW-YWDLYRPIS 337

Query: 119 LLKDGVIL--HSSGHVLGYNGPDNIF 48
           LL +G IL  H S  ++ YN  D  F
Sbjct: 338 LLSNGEILMSHKSKAMVSYNPEDRSF 363


>ref|XP_002533477.1| conserved hypothetical protein [Ricinus communis]
           gi|223526670|gb|EEF28909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/56 (41%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
 Frame = -1

Query: 308 NFCLYLSALGGCLSLIH-IVSNEHIEIWVMKEYGMQSSWVKEYTISNVMDNYDFEI 144
           N+C+ LS LGGCL + + + + +H++IW++KEYG++ SW K ++I  ++DN  F++
Sbjct: 3   NYCM-LSELGGCLCMSNNVFAYDHVDIWIVKEYGVEESWTKSFSIPKLLDNVLFDL 57


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