BLASTX nr result

ID: Coptis21_contig00039663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039663
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Viti...   149   2e-34
emb|CBI18342.3| unnamed protein product [Vitis vinifera]              147   9e-34
emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]   147   9e-34
ref|XP_002534298.1| conserved hypothetical protein [Ricinus comm...   143   2e-32
ref|NP_001174699.1| Os06g0256100 [Oryza sativa Japonica Group] g...   134   6e-30

>ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Vitis vinifera]
            gi|297745068|emb|CBI38660.3| unnamed protein product
            [Vitis vinifera]
          Length = 1036

 Score =  149 bits (376), Expect = 2e-34
 Identities = 75/119 (63%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
 Frame = +3

Query: 6    LYFNIEAEELPRLKQCLFVFFEHYPALSSDHKKYISKAFIPIIRSIWPGIYGSTGGSAVL 185
            LYF+ E +EL RLKQCL VFFEHYP+LS+DHKK ISK+F+P++RS+WPGI    GGS  +
Sbjct: 714  LYFSNETKELQRLKQCLSVFFEHYPSLSADHKKCISKSFMPVMRSMWPGINTRAGGSPFM 773

Query: 186  VSRLRKRASQASRFMVQMMQTPLYSKETEVQNEN-GNKSQENIDGSVEALVGFDDGEEG 359
            VS +RK A QASRFM+QMMQ PLY+KETE QNEN  N+  E +DG  E  + F+ GEEG
Sbjct: 774  VSNVRKLAVQASRFMLQMMQAPLYAKETEKQNENQNNELPEVLDGFSEPSLDFECGEEG 832


>emb|CBI18342.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  147 bits (371), Expect = 9e-34
 Identities = 75/119 (63%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
 Frame = +3

Query: 6   LYFNIEAEELPRLKQCLFVFFEHYPALSSDHKKYISKAFIPIIRSIWPGIYGSTGGSAVL 185
           LYF+ E +EL RLKQCL VFFEHY +LS+DHKK ISK+F+P++RS+WPGI  S GGS  L
Sbjct: 326 LYFSNETKELQRLKQCLSVFFEHYRSLSADHKKCISKSFMPVMRSMWPGINTSAGGSPFL 385

Query: 186 VSRLRKRASQASRFMVQMMQTPLYSKETEVQNEN-GNKSQENIDGSVEALVGFDDGEEG 359
           VS +RK A QASRFM+QMMQ PLY+KET+ QNEN  N+  E +DG  E  + F+ GEEG
Sbjct: 386 VSNMRKLAVQASRFMMQMMQAPLYAKETKKQNENQNNELPEVLDGFSEPSLDFECGEEG 444


>emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]
          Length = 862

 Score =  147 bits (371), Expect = 9e-34
 Identities = 74/119 (62%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
 Frame = +3

Query: 6    LYFNIEAEELPRLKQCLFVFFEHYPALSSDHKKYISKAFIPIIRSIWPGIYGSTGGSAVL 185
            LYF+ E +EL RLKQCL VFFEHYP+LS+DHKK  SK+F+P++RS+WPGI    GGS  +
Sbjct: 714  LYFSNETKELQRLKQCLSVFFEHYPSLSADHKKCXSKSFMPVMRSMWPGINTRAGGSPFM 773

Query: 186  VSRLRKRASQASRFMVQMMQTPLYSKETEVQNEN-GNKSQENIDGSVEALVGFDDGEEG 359
            VS +RK A QASRFM+QMMQ PLY+KETE QNEN  N+  E +DG  E  + F+ GEEG
Sbjct: 774  VSNVRKLAVQASRFMLQMMQAPLYAKETEKQNENQNNELPEVLDGFSEPSLDFECGEEG 832


>ref|XP_002534298.1| conserved hypothetical protein [Ricinus communis]
           gi|223525547|gb|EEF28084.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/121 (57%), Positives = 98/121 (80%), Gaps = 3/121 (2%)
 Frame = +3

Query: 6   LYFNIEAEELPRLKQCLFVFFEHYPALSSDHK--KYISKAFIPIIRSIWPGIYGSTGGSA 179
           LYF+ E ++L RLKQCL VFFEHYP LS++HK  K +SKAF+P++RS+WPGIYG+ GGS+
Sbjct: 104 LYFSNETKDLERLKQCLSVFFEHYPCLSANHKASKCLSKAFVPVMRSMWPGIYGNAGGSS 163

Query: 180 VLVSRLRKRASQASRFMVQMMQTPLYSKETEVQNENGN-KSQENIDGSVEALVGFDDGEE 356
            +VS +RKRA QASRFM+QMMQ PL+ ++TE+++ENG+ +  E +D S+++   F+ G+E
Sbjct: 164 SVVSNMRKRAVQASRFMLQMMQAPLFVRKTEIEDENGSMEFPETVDSSLQS--SFECGDE 221

Query: 357 G 359
           G
Sbjct: 222 G 222


>ref|NP_001174699.1| Os06g0256100 [Oryza sativa Japonica Group]
           gi|52077257|dbj|BAD46299.1| chromosome condensation
           protein-like [Oryza sativa Japonica Group]
           gi|255676899|dbj|BAH93427.1| Os06g0256100 [Oryza sativa
           Japonica Group]
          Length = 398

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/119 (56%), Positives = 86/119 (72%)
 Frame = +3

Query: 3   SLYFNIEAEELPRLKQCLFVFFEHYPALSSDHKKYISKAFIPIIRSIWPGIYGSTGGSAV 182
           SLYF  E +EL RLKQCL VFF+HYPALS  HK+ +S AF+P++R++WPG+YG+ GGSA 
Sbjct: 70  SLYFMEETKELKRLKQCLSVFFQHYPALSDKHKRCVSSAFVPVMRAMWPGLYGNVGGSAH 129

Query: 183 LVSRLRKRASQASRFMVQMMQTPLYSKETEVQNENGNKSQENIDGSVEALVGFDDGEEG 359
            VS+ RK A+QA+RFMVQM+QTPL+S ET    E  + S E+     + L  FD  EEG
Sbjct: 130 AVSKRRKYAAQAARFMVQMVQTPLFSTET---TEQASSSPESQSTKPDMLNNFDISEEG 185


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