BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039654
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23729.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266...   108   6e-22
ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_003590183.1| DNA mismatch repair protein mutS [Medicago t...    98   8e-19
ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...    95   5e-18

>emb|CBI23729.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/70 (77%), Positives = 60/70 (85%), Gaps = 2/70 (2%)
 Frame = +3

Query: 3    RVRAHRSKEG--NVSFLYVIVPGKSIACQLETLLINQLPRQGFQLINLADGKHRNFGTSN 176
            RVRAHRSKEG    SFLY +VPGKS+ACQLETLLINQLP QGFQL+N ADGKHRNFGT +
Sbjct: 1045 RVRAHRSKEGMQKASFLYFVVPGKSLACQLETLLINQLPVQGFQLVNRADGKHRNFGTLD 1104

Query: 177  LSLESLTLHQ 206
             S+E +TLHQ
Sbjct: 1105 HSVEVVTLHQ 1114


>ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266612 [Vitis vinifera]
          Length = 1144

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/70 (77%), Positives = 60/70 (85%), Gaps = 2/70 (2%)
 Frame = +3

Query: 3    RVRAHRSKEG--NVSFLYVIVPGKSIACQLETLLINQLPRQGFQLINLADGKHRNFGTSN 176
            RVRAHRSKEG    SFLY +VPGKS+ACQLETLLINQLP QGFQL+N ADGKHRNFGT +
Sbjct: 1075 RVRAHRSKEGMQKASFLYFVVPGKSLACQLETLLINQLPVQGFQLVNRADGKHRNFGTLD 1134

Query: 177  LSLESLTLHQ 206
             S+E +TLHQ
Sbjct: 1135 HSVEVVTLHQ 1144


>ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|222863550|gb|EEF00681.1|
            predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/69 (75%), Positives = 62/69 (89%), Gaps = 2/69 (2%)
 Frame = +3

Query: 3    RVRAHRSKEG--NVSFLYVIVPGKSIACQLETLLINQLPRQGFQLINLADGKHRNFGTSN 176
            R+R+HRSKEG  N +FLY IVPGKSIAC LETLLINQLP +GF+L N++DGKHRNFGT+N
Sbjct: 1062 RIRSHRSKEGMDNAAFLYFIVPGKSIACLLETLLINQLPIKGFKLTNVSDGKHRNFGTTN 1121

Query: 177  LSLESLTLH 203
            LSLES+T+H
Sbjct: 1122 LSLESVTVH 1130


>ref|XP_003590183.1| DNA mismatch repair protein mutS [Medicago truncatula]
            gi|355479231|gb|AES60434.1| DNA mismatch repair protein
            mutS [Medicago truncatula]
          Length = 1230

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/61 (77%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
 Frame = +3

Query: 3    RVRAHRSKEG--NVSFLYVIVPGKSIACQLETLLINQLPRQGFQLINLADGKHRNFGTSN 176
            RVRAHRSKEG  + SFLY +VPGKS+ACQ+ETLLINQLP +GF L N+ADGKHRNFGTSN
Sbjct: 1168 RVRAHRSKEGMQDASFLYFLVPGKSLACQIETLLINQLPNRGFLLSNIADGKHRNFGTSN 1227

Query: 177  L 179
            +
Sbjct: 1228 V 1228


>ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH1,
           mitochondrial-like, partial [Cucumis sativus]
          Length = 675

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/68 (66%), Positives = 59/68 (86%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   RVRAHRSKEG--NVSFLYVIVPGKSIACQLETLLINQLPRQGFQLINLADGKHRNFGTSN 176
           RV++HR KEG  + +FLY++VPGKS+ACQLETLLIN+LP  GFQL N+ADGKHRNFGT+N
Sbjct: 606 RVQSHRLKEGMRDAAFLYLMVPGKSLACQLETLLINRLPDHGFQLTNVADGKHRNFGTAN 665

Query: 177 LSLESLTL 200
           L  +++T+
Sbjct: 666 LLSDNVTV 673