BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039652
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15366.3| unnamed protein product [Vitis vinifera]              149   3e-34
ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_002322051.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_002512026.1| pentatricopeptide repeat-containing protein,...   142   3e-32

>emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/111 (61%), Positives = 90/111 (81%)
 Frame = -1

Query: 334 GKDAVELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGQKYFSEMRTKNHIEPKLEHYA 155
           GK+A+ELFE+M   GLKPD FTF  +LMACSH+GLV +G +YF++M   ++IEPKLEHY 
Sbjct: 493 GKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYT 552

Query: 154 CMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVS 2
           C+VDMLGRAG ++ AL L+EEMP  PD+ IW +LLSSC+ HG++ LG+KV+
Sbjct: 553 CVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVA 603


>ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/111 (61%), Positives = 90/111 (81%)
 Frame = -1

Query: 334 GKDAVELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGQKYFSEMRTKNHIEPKLEHYA 155
           GK+A+ELFE+M   GLKPD FTF  +LMACSH+GLV +G +YF++M   ++IEPKLEHY 
Sbjct: 591 GKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYT 650

Query: 154 CMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVS 2
           C+VDMLGRAG ++ AL L+EEMP  PD+ IW +LLSSC+ HG++ LG+KV+
Sbjct: 651 CVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVA 701


>ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
            [Glycine max]
          Length = 975

 Score =  145 bits (367), Expect = 3e-33
 Identities = 64/111 (57%), Positives = 90/111 (81%)
 Frame = -1

Query: 334  GKDAVELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGQKYFSEMRTKNHIEPKLEHYA 155
            G  A+ELFE MQ++G +PD+FTF+ +L+AC+H+GLV EG KY  +M+    ++PKLEHYA
Sbjct: 685  GLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYA 744

Query: 154  CMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVS 2
            C+VDMLGRAG L  AL L+ EMP++PD+GIW +LLSSC+ +GD+ +G++VS
Sbjct: 745  CVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVS 795


>ref|XP_002322051.1| predicted protein [Populus trichocarpa] gi|222869047|gb|EEF06178.1|
           predicted protein [Populus trichocarpa]
          Length = 924

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/111 (59%), Positives = 85/111 (76%)
 Frame = -1

Query: 334 GKDAVELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGQKYFSEMRTKNHIEPKLEHYA 155
           GK+A+EL+ERM+  G  PD FT+I +LMAC H+GLV EG KYF EM+  N IEPKLEHYA
Sbjct: 634 GKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYA 693

Query: 154 CMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVS 2
           C++DML RAG L+ AL L+ EMPE+ D  IW +LL SC+T G + +G+KV+
Sbjct: 694 CLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVA 744


>ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549206|gb|EEF50695.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 810

 Score =  142 bits (358), Expect = 3e-32
 Identities = 64/111 (57%), Positives = 87/111 (78%)
 Frame = -1

Query: 334 GKDAVELFERMQSEGLKPDAFTFISLLMACSHSGLVGEGQKYFSEMRTKNHIEPKLEHYA 155
           G++++ELFERM+  G  PD FTFI +L  CSH+GLV EG KYF+EM+  + IEPKLEHYA
Sbjct: 520 GEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYA 579

Query: 154 CMVDMLGRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVS 2
           C++DMLGRAG L+ AL L+ EMPE+PD+ +W +LLS C+  G++ +GQ V+
Sbjct: 580 CVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVA 630