BLASTX nr result

ID: Coptis21_contig00039602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039602
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592239.1| Serine carboxypeptidase-like protein [Medica...    55   6e-06
gb|AAQ63884.1| putative serine carboxypeptidase [Medicago trunca...    55   6e-06
ref|XP_003592242.1| Serine carboxypeptidase-like protein [Medica...    55   8e-06

>ref|XP_003592239.1| Serine carboxypeptidase-like protein [Medicago truncatula]
           gi|357462109|ref|XP_003601336.1| Serine
           carboxypeptidase-like protein [Medicago truncatula]
           gi|355481287|gb|AES62490.1| Serine carboxypeptidase-like
           protein [Medicago truncatula]
           gi|355490384|gb|AES71587.1| Serine carboxypeptidase-like
           protein [Medicago truncatula]
          Length = 495

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/31 (77%), Positives = 25/31 (80%)
 Frame = +3

Query: 57  NDFYPCSDNYVTAYLNLLEVQKSLHTKPTTW 149
           NDF PCSD YVTAYLN  EVQK+LH KPT W
Sbjct: 345 NDFDPCSDYYVTAYLNRPEVQKALHAKPTNW 375


>gb|AAQ63884.1| putative serine carboxypeptidase [Medicago truncatula]
          Length = 495

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/31 (77%), Positives = 25/31 (80%)
 Frame = +3

Query: 57  NDFYPCSDNYVTAYLNLLEVQKSLHTKPTTW 149
           NDF PCSD YVTAYLN  EVQK+LH KPT W
Sbjct: 345 NDFDPCSDYYVTAYLNRPEVQKALHAKPTNW 375


>ref|XP_003592242.1| Serine carboxypeptidase-like protein [Medicago truncatula]
           gi|357462115|ref|XP_003601339.1| Serine
           carboxypeptidase-like protein [Medicago truncatula]
           gi|355481290|gb|AES62493.1| Serine carboxypeptidase-like
           protein [Medicago truncatula]
           gi|355490387|gb|AES71590.1| Serine carboxypeptidase-like
           protein [Medicago truncatula]
          Length = 494

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = +3

Query: 18  DN*IQSFSVKLARNDFYPCSDNYVTAYLNLLEVQKSLHTKPTTW 149
           D+ +++ S     NDF PCSDNY  AYLN  EVQK+LH KPT W
Sbjct: 331 DSSLKNGSTGYVTNDFDPCSDNYGIAYLNRPEVQKALHAKPTNW 374


Top