BLASTX nr result

ID: Coptis21_contig00039582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039582
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300459.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002332743.1| cc-nbs-lrr resistance protein [Populus trich...   134   8e-30
ref|XP_002332822.1| cc-nbs-lrr resistance protein [Populus trich...   133   1e-29
ref|XP_004138985.1| PREDICTED: probable disease resistance prote...   132   3e-29
ref|XP_002332774.1| cc-nbs-lrr resistance protein [Populus trich...   132   3e-29

>ref|XP_002300459.1| predicted protein [Populus trichocarpa] gi|222847717|gb|EEE85264.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  134 bits (337), Expect = 8e-30
 Identities = 69/158 (43%), Positives = 102/158 (64%), Gaps = 8/158 (5%)
 Frame = -1

Query: 450 ENSSALPTVAKDIANECKGVPLAIVAVARALRGKDEYLWDNALQQLKESVFSKVTPV--- 280
           +  S L TVA+++A EC+G+P+A+V V RALRGK    W+ A +QLKES F ++  +   
Sbjct: 14  DGDSTLNTVAREVARECQGLPIALVTVGRALRGKSRVQWEVASKQLKESQFVRMEQIDEQ 73

Query: 279 ---FSSIKMSYNYMQSEEHKMCFLFCSLFPEDFKIDMEELFCYLMGEKLLGDGDTILVAR 109
              ++ +K+SY+Y++ EE K CF+ C LFPED+ I +E+L  Y +G  L  D + I  AR
Sbjct: 74  NNAYTCLKLSYDYLKYEETKSCFVLCCLFPEDYDIPIEDLTRYAVGYGLHQDAEPIEDAR 133

Query: 108 RKFYVIVDELVSSCLLL--RDEQFIKMHDLVRDAAISI 1
           ++  V ++ L   C+LL    E+ +KMHDLVRD AI I
Sbjct: 134 KRVSVAIENLKDCCMLLGSETEEHVKMHDLVRDVAIQI 171


>ref|XP_002332743.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833055|gb|EEE71532.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 656

 Score =  134 bits (337), Expect = 8e-30
 Identities = 71/173 (41%), Positives = 108/173 (62%), Gaps = 16/173 (9%)
 Frame = -1

Query: 471 QNRAWDV--------ENSSALPTVAKDIANECKGVPLAIVAVARALRGKDEYLWDNALQQ 316
           +N AW +        +  S L  VAK++A EC+G+PLA+V V +AL+ K E+ W+ A ++
Sbjct: 308 ENEAWALFKINAGLRDEDSDLNRVAKEVARECQGLPLALVTVGKALKDKSEHEWEVASEE 367

Query: 315 LKES------VFSKVTPVFSSIKMSYNYMQSEEHKMCFLFCSLFPEDFKIDMEELFCYLM 154
           LK+S       F      ++ +K+SY+Y++ EE K+CFL C LFPED+ I +EEL  Y +
Sbjct: 368 LKKSQSRHMETFDDRRNAYACLKLSYDYLKHEETKLCFLLCCLFPEDYNIPIEELTRYAV 427

Query: 153 GEKLLGDGDTILVARRKFYVIVDELVSSCLLL--RDEQFIKMHDLVRDAAISI 1
           G  L  D  +I  AR++ Y+ ++ L + C+LL    E+++KMHDLVRD AI I
Sbjct: 428 GYGLYQDVQSIEGARKRVYMEIENLKACCMLLGTETEEYVKMHDLVRDVAIQI 480


>ref|XP_002332822.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834210|gb|EEE72687.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 817

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/157 (43%), Positives = 101/157 (64%), Gaps = 7/157 (4%)
 Frame = -1

Query: 450 ENSSALPTVAKDIANECKGVPLAIVAVARALRGKDEYLWDNALQQLKESVFSKVTPV--- 280
           +  S L TVA+ +A ECKG+P+A+V + RALR K E  W    +QLK S F  +  +   
Sbjct: 159 DGDSTLNTVARKVARECKGLPIALVTLGRALRDKSENQWKRVSKQLKNSQFVDMEQIEEK 218

Query: 279 --FSSIKMSYNYMQSEEHKMCFLFCSLFPEDFKIDMEELFCYLMGEKLLGDGDTILVARR 106
             ++ +K+SY+Y++S+E K+CFL C LFPED+ I +E+L  Y +G  L  DG+ I  AR 
Sbjct: 219 NAYACLKLSYDYLKSKETKLCFLLCCLFPEDYNIPIEDLTRYAVGYGLHQDGEPIEDARE 278

Query: 105 KFYVIVDELVSSCLLL--RDEQFIKMHDLVRDAAISI 1
           + +V ++ L + CLLL    E+ ++MHDLVRD AI I
Sbjct: 279 QVHVAIEYLKACCLLLGTETEEHVRMHDLVRDVAIQI 315


>ref|XP_004138985.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Cucumis sativus] gi|449477888|ref|XP_004155153.1|
           PREDICTED: probable disease resistance protein
           At4g27220-like [Cucumis sativus]
          Length = 1413

 Score =  132 bits (332), Expect = 3e-29
 Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 9/167 (5%)
 Frame = -1

Query: 474 FQNRAWDVENSSALPTVAKDIANECKGVPLAIVAVARALRGKDEYLWDNALQQLKESVFS 295
           F+  A ++  +S   ++A +I  EC  +P+AI  +ARALR K   +W +AL QL+  VF 
Sbjct: 314 FRKMAGEIVETSDFKSIAVEIVRECAHLPIAITTIARALRNKPASIWKDALIQLRNPVFV 373

Query: 294 KVTP----VFSSIKMSYNYMQSEEHKMCFLFCSLFPEDFKIDMEELFCYLMGEKLLGDGD 127
            +      V+SS+K+SY+Y+ SEE K  FL CS+FPED+ ID + L  Y MG  LL   +
Sbjct: 374 NIREINKKVYSSLKLSYDYLDSEEAKSLFLLCSMFPEDYIIDCQVLHVYAMGMGLLHGVE 433

Query: 126 TILVARRKFYVIVDELVSSCLLLRDE-----QFIKMHDLVRDAAISI 1
           ++  AR +   +VD+L+SS LLL++       ++KMHD+VRD AI I
Sbjct: 434 SVAQARNRITKLVDDLISSSLLLKESNVDLVMYVKMHDIVRDVAIII 480


>ref|XP_002332774.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834669|gb|EEE73132.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 813

 Score =  132 bits (332), Expect = 3e-29
 Identities = 70/172 (40%), Positives = 106/172 (61%), Gaps = 16/172 (9%)
 Frame = -1

Query: 468 NRAWDV--------ENSSALPTVAKDIANECKGVPLAIVAVARALRGKDEYLWDNALQQL 313
           + AWD+        +  S L TV +++A EC+G+P+A+V V RALRGK    W+ A +QL
Sbjct: 102 DEAWDLFRINAGLRDGDSTLNTVTREVARECQGLPIALVTVGRALRGKSRVQWEVASKQL 161

Query: 312 KESVFSKVTPV------FSSIKMSYNYMQSEEHKMCFLFCSLFPEDFKIDMEELFCYLMG 151
           KES F ++  +      ++ +K+SY+Y++ EE K CF+ C LFPED+ I +E+L  Y +G
Sbjct: 162 KESQFVRMEQIDEQNNAYTCLKLSYDYLKYEETKSCFVLCCLFPEDYDIPIEDLTRYAVG 221

Query: 150 EKLLGDGDTILVARRKFYVIVDELVSSCLLL--RDEQFIKMHDLVRDAAISI 1
             L  D + I  AR++  V ++ L   C+LL    E+ ++MHDLVRD AI I
Sbjct: 222 YGLHQDAEPIEDARKRVSVAIENLKDCCMLLGTETEEHVRMHDLVRDFAIQI 273


Top