BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039578
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285679.1| PREDICTED: probable DNA primase large subuni...   243   1e-62
ref|XP_002514889.1| DNA primase large subunit, putative [Ricinus...   234   5e-60
ref|XP_004140536.1| PREDICTED: probable DNA primase large subuni...   234   7e-60
ref|XP_003524908.1| PREDICTED: probable DNA primase large subuni...   233   2e-59
ref|NP_001170760.1| uncharacterized protein LOC100384853 [Zea ma...   233   2e-59

>ref|XP_002285679.1| PREDICTED: probable DNA primase large subunit [Vitis vinifera]
           gi|297741936|emb|CBI33371.3| unnamed protein product
           [Vitis vinifera]
          Length = 452

 Score =  243 bits (620), Expect = 1e-62
 Identities = 113/128 (88%), Positives = 118/128 (92%)
 Frame = -2

Query: 395 KAEFSHKVGAERFDKEYAYGIRHNYGKEGKRTDYTPYSCQKIILSTPGAGDHHGCPYRHF 216
           KAEFS KVG+ERFDKEYAY IRHNYGKEGKRTDYTPYSCQKII STPG GDHHGCPYRHF
Sbjct: 320 KAEFSQKVGSERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHF 379

Query: 215 SEENLRAALSKMGVGGRSMEDVMEKVRNRHYQLACTLTFEAVHGTSCDAGINHPNQCFTD 36
           SEENLRAAL KMGVG R+MEDVM+KVRNRHYQLACTLTFEAVHG+SCDAGINHPNQ F+D
Sbjct: 380 SEENLRAALGKMGVGNRAMEDVMDKVRNRHYQLACTLTFEAVHGSSCDAGINHPNQYFSD 439

Query: 35  SQNILKLK 12
           SQ IL  K
Sbjct: 440 SQKILHPK 447


>ref|XP_002514889.1| DNA primase large subunit, putative [Ricinus communis]
           gi|223545940|gb|EEF47443.1| DNA primase large subunit,
           putative [Ricinus communis]
          Length = 444

 Score =  234 bits (597), Expect = 5e-60
 Identities = 108/128 (84%), Positives = 116/128 (90%)
 Frame = -2

Query: 395 KAEFSHKVGAERFDKEYAYGIRHNYGKEGKRTDYTPYSCQKIILSTPGAGDHHGCPYRHF 216
           KAEFS KVGAERFDKEYAY IRHNYG+EGKRTDYTPY+CQKII STPG GDHHGCPYRHF
Sbjct: 315 KAEFSQKVGAERFDKEYAYSIRHNYGREGKRTDYTPYACQKIISSTPGVGDHHGCPYRHF 374

Query: 215 SEENLRAALSKMGVGGRSMEDVMEKVRNRHYQLACTLTFEAVHGTSCDAGINHPNQCFTD 36
           SEENLRAALS MGV   +++DVM+KVRNRHYQLACTLTFEA+HG SCDAGINHPNQ F+D
Sbjct: 375 SEENLRAALSGMGVNSGAVDDVMDKVRNRHYQLACTLTFEAIHGLSCDAGINHPNQYFSD 434

Query: 35  SQNILKLK 12
           SQ ILK K
Sbjct: 435 SQKILKPK 442


>ref|XP_004140536.1| PREDICTED: probable DNA primase large subunit-like [Cucumis
           sativus] gi|449521050|ref|XP_004167544.1| PREDICTED: LOW
           QUALITY PROTEIN: probable DNA primase large subunit-like
           [Cucumis sativus]
          Length = 452

 Score =  234 bits (596), Expect = 7e-60
 Identities = 103/131 (78%), Positives = 118/131 (90%)
 Frame = -2

Query: 395 KAEFSHKVGAERFDKEYAYGIRHNYGKEGKRTDYTPYSCQKIILSTPGAGDHHGCPYRHF 216
           +AEFS +VGAERFDKEYAY IRHNYGKEGKR DY+PYSCQK+I S+P  GDHHGCPYRHF
Sbjct: 320 RAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKVISSSPSVGDHHGCPYRHF 379

Query: 215 SEENLRAALSKMGVGGRSMEDVMEKVRNRHYQLACTLTFEAVHGTSCDAGINHPNQCFTD 36
           SE+NLRAAL KMGV  R+MED+M+KVRNRHYQLACTLTFE++HG++CDAGINHPNQ F D
Sbjct: 380 SEDNLRAALGKMGVNNRTMEDIMDKVRNRHYQLACTLTFESIHGSTCDAGINHPNQYFID 439

Query: 35  SQNILKLKNNS 3
           SQ +L+ KNNS
Sbjct: 440 SQKVLQSKNNS 450


>ref|XP_003524908.1| PREDICTED: probable DNA primase large subunit-like [Glycine max]
          Length = 457

 Score =  233 bits (593), Expect = 2e-59
 Identities = 107/131 (81%), Positives = 118/131 (90%)
 Frame = -2

Query: 395 KAEFSHKVGAERFDKEYAYGIRHNYGKEGKRTDYTPYSCQKIILSTPGAGDHHGCPYRHF 216
           ++EFS KVG E+F+K+YAY IRHNYGKEGKRTDYTPYSCQKII STPGAGDHHGCPYRHF
Sbjct: 325 RSEFSKKVGLEKFEKQYAYNIRHNYGKEGKRTDYTPYSCQKIISSTPGAGDHHGCPYRHF 384

Query: 215 SEENLRAALSKMGVGGRSMEDVMEKVRNRHYQLACTLTFEAVHGTSCDAGINHPNQCFTD 36
           SEENLRAALS MGV  ++MEDVM+KVRNRHYQLACTLTFEA+HG  CDAGINHPNQ F+D
Sbjct: 385 SEENLRAALSGMGVNSQAMEDVMDKVRNRHYQLACTLTFEALHGMPCDAGINHPNQYFSD 444

Query: 35  SQNILKLKNNS 3
           SQ ILK K +S
Sbjct: 445 SQKILKPKKDS 455


>ref|NP_001170760.1| uncharacterized protein LOC100384853 [Zea mays]
           gi|238007372|gb|ACR34721.1| unknown [Zea mays]
          Length = 260

 Score =  233 bits (593), Expect = 2e-59
 Identities = 101/131 (77%), Positives = 119/131 (90%)
 Frame = -2

Query: 395 KAEFSHKVGAERFDKEYAYGIRHNYGKEGKRTDYTPYSCQKIILSTPGAGDHHGCPYRHF 216
           +AEFS K+G+ERFDKEYAY IRHNYGKEGKRTDYTPYSCQKII +TPG GDHHGCP+RHF
Sbjct: 121 RAEFSQKIGSERFDKEYAYAIRHNYGKEGKRTDYTPYSCQKIISATPGVGDHHGCPFRHF 180

Query: 215 SEENLRAALSKMGVGGRSMEDVMEKVRNRHYQLACTLTFEAVHGTSCDAGINHPNQCFTD 36
            EENLRAAL+KMGVGG ++E+VM+KV+NRHYQ+ACTLTFEA HG SCD+GINHPNQ F++
Sbjct: 181 GEENLRAALNKMGVGGHALEEVMDKVKNRHYQVACTLTFEATHGVSCDSGINHPNQYFSE 240

Query: 35  SQNILKLKNNS 3
           SQ +L+ KN +
Sbjct: 241 SQKVLRAKNQT 251