BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039575
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV41136.1| D5-type cyclin [Populus x canadensis]                  122   2e-26
ref|XP_002303399.1| predicted protein [Populus trichocarpa] gi|1...   122   2e-26
ref|XP_002510103.1| cyclin d, putative [Ricinus communis] gi|223...   116   2e-24
ref|XP_002525266.1| cyclin d, putative [Ricinus communis] gi|223...   114   6e-24
ref|XP_002283315.1| PREDICTED: cyclin-D5-1 [Vitis vinifera] gi|3...   114   1e-23

>gb|AEV41136.1| D5-type cyclin [Populus x canadensis]
          Length = 337

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/98 (62%), Positives = 76/98 (77%), Gaps = 3/98 (3%)
 Frame = -1

Query: 287 EYIKMLIETENSGFGLR---SFNDTLVTSKDWLQRGRFNAMEWILRMRVLFGFCFQTAYL 117
           EY++ L+E E   FG R   SF+D L+TS +WL+  R +A+EWIL  R ++GF F TAYL
Sbjct: 49  EYVEKLVERETITFGYRCHASFDDCLITSHNWLKFARLDAIEWILNTRAIYGFRFHTAYL 108

Query: 116 SVSYFDRFLSKRSIDSEKPWAIQLLSVACLTLAAKMEE 3
           SV+YFDRF+SKRSID  K WAI+LLSVACL+LAAKMEE
Sbjct: 109 SVTYFDRFVSKRSIDEGKLWAIRLLSVACLSLAAKMEE 146


>ref|XP_002303399.1| predicted protein [Populus trichocarpa]
           gi|159025723|emb|CAN88862.1| D5-type cyclin [Populus
           trichocarpa] gi|222840831|gb|EEE78378.1| predicted
           protein [Populus trichocarpa]
          Length = 337

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/98 (62%), Positives = 76/98 (77%), Gaps = 3/98 (3%)
 Frame = -1

Query: 287 EYIKMLIETENSGFGLR---SFNDTLVTSKDWLQRGRFNAMEWILRMRVLFGFCFQTAYL 117
           EY++ L+E E   FG R   SF+D L+TS +WL+  R +A+EWIL  R ++GF F TAYL
Sbjct: 49  EYVEKLVERETITFGYRCHASFDDCLITSHNWLKFARLDAIEWILNTRAIYGFRFHTAYL 108

Query: 116 SVSYFDRFLSKRSIDSEKPWAIQLLSVACLTLAAKMEE 3
           SV+YFDRF+SKRSID  K WAI+LLSVACL+LAAKMEE
Sbjct: 109 SVTYFDRFVSKRSIDEGKLWAIRLLSVACLSLAAKMEE 146


>ref|XP_002510103.1| cyclin d, putative [Ricinus communis] gi|223550804|gb|EEF52290.1|
           cyclin d, putative [Ricinus communis]
          Length = 327

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/97 (58%), Positives = 75/97 (77%)
 Frame = -1

Query: 293 EDEYIKMLIETENSGFGLRSFNDTLVTSKDWLQRGRFNAMEWILRMRVLFGFCFQTAYLS 114
           E+EY++ML+E E S F     + +L T  +W++  R  A+ WIL+ R +FGF FQTAYLS
Sbjct: 39  EEEYVEMLVEKEIS-FSKSKEDQSLSTFDNWVKFARLEAITWILKNRAIFGFGFQTAYLS 97

Query: 113 VSYFDRFLSKRSIDSEKPWAIQLLSVACLTLAAKMEE 3
           ++YFDRFLS+RSID EK WA++LLSVACL+LAAKMEE
Sbjct: 98  ITYFDRFLSRRSIDREKSWAVKLLSVACLSLAAKMEE 134


>ref|XP_002525266.1| cyclin d, putative [Ricinus communis] gi|223535424|gb|EEF37094.1|
           cyclin d, putative [Ricinus communis]
          Length = 268

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/113 (52%), Positives = 78/113 (69%)
 Frame = -1

Query: 341 DSLTRLSSFCVITQQCEDEYIKMLIETENSGFGLRSFNDTLVTSKDWLQRGRFNAMEWIL 162
           +S +  SS C + +  E EYI+ ++E E+  F     +D+   +  WL+  R +A++WI 
Sbjct: 35  ESSSSSSSSCFVLENEEIEYIEKMVEMESRSFTCS--DDSSFANYSWLRCARLDAIDWIF 92

Query: 161 RMRVLFGFCFQTAYLSVSYFDRFLSKRSIDSEKPWAIQLLSVACLTLAAKMEE 3
             R +FGF F TAYLSV+YFDRFLSKRSID  K WAI+LLSVACL+LAAKMEE
Sbjct: 93  NTRAIFGFRFHTAYLSVTYFDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEE 145


>ref|XP_002283315.1| PREDICTED: cyclin-D5-1 [Vitis vinifera]
           gi|302142205|emb|CBI19408.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/104 (53%), Positives = 80/104 (76%)
 Frame = -1

Query: 314 CVITQQCEDEYIKMLIETENSGFGLRSFNDTLVTSKDWLQRGRFNAMEWILRMRVLFGFC 135
           C  +   +DEY+++L++ E S FG+++ +  L+ +  W++  R +A+ WILR R +FGF 
Sbjct: 28  CTPSDTEDDEYVQLLVDREMS-FGIKTNHSFLILN--WVKLARLDAVAWILRTRAVFGFR 84

Query: 134 FQTAYLSVSYFDRFLSKRSIDSEKPWAIQLLSVACLTLAAKMEE 3
           FQTAYL V+Y DRFLS+R+IDS+K WAI+LLSVACL+LAAKMEE
Sbjct: 85  FQTAYLCVAYLDRFLSRRAIDSDKTWAIRLLSVACLSLAAKMEE 128