BLASTX nr result
ID: Coptis21_contig00039558
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039558 (282 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31 emb|CBI15973.3| unnamed protein product [Vitis vinifera] 131 6e-29 ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 131 6e-29 emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] 131 6e-29 ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2... 121 7e-26 >ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis sativus] gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis sativus] gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis sativus] Length = 733 Score = 140 bits (352), Expect = 1e-31 Identities = 68/93 (73%), Positives = 77/93 (82%) Frame = -2 Query: 281 AHMLRTGLFFDPYSASRLITLCTVSPFSTSLEYARKLFDQIPQPNIYTWNTLIRAYASSS 102 A MLRTGLFFDP+SAS+L T +S FST L+YAR LFDQIPQPN+YTWNTLIRAYASSS Sbjct: 46 ARMLRTGLFFDPFSASKLFTASALSSFST-LDYARNLFDQIPQPNLYTWNTLIRAYASSS 104 Query: 101 DPIQCFFIFNQMLCQCSDLPNKYTFPFLIKAGS 3 DP Q F IF +L +C DLPNK+TFPF+IKA S Sbjct: 105 DPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAAS 137 >emb|CBI15973.3| unnamed protein product [Vitis vinifera] Length = 652 Score = 131 bits (329), Expect = 6e-29 Identities = 65/93 (69%), Positives = 76/93 (81%) Frame = -2 Query: 281 AHMLRTGLFFDPYSASRLITLCTVSPFSTSLEYARKLFDQIPQPNIYTWNTLIRAYASSS 102 A MLRTGLFFDP+SASRLIT +SPF SL+YA+++FDQIP PN+YTWNTLIRAYASSS Sbjct: 56 AQMLRTGLFFDPFSASRLITAAALSPFP-SLDYAQQVFDQIPHPNLYTWNTLIRAYASSS 114 Query: 101 DPIQCFFIFNQMLCQCSDLPNKYTFPFLIKAGS 3 +P Q IF +ML Q D P+K+TFPFLIKA S Sbjct: 115 NPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147 >ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Vitis vinifera] Length = 743 Score = 131 bits (329), Expect = 6e-29 Identities = 65/93 (69%), Positives = 76/93 (81%) Frame = -2 Query: 281 AHMLRTGLFFDPYSASRLITLCTVSPFSTSLEYARKLFDQIPQPNIYTWNTLIRAYASSS 102 A MLRTGLFFDP+SASRLIT +SPF SL+YA+++FDQIP PN+YTWNTLIRAYASSS Sbjct: 56 AQMLRTGLFFDPFSASRLITAAALSPFP-SLDYAQQVFDQIPHPNLYTWNTLIRAYASSS 114 Query: 101 DPIQCFFIFNQMLCQCSDLPNKYTFPFLIKAGS 3 +P Q IF +ML Q D P+K+TFPFLIKA S Sbjct: 115 NPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147 >emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] Length = 694 Score = 131 bits (329), Expect = 6e-29 Identities = 65/93 (69%), Positives = 76/93 (81%) Frame = -2 Query: 281 AHMLRTGLFFDPYSASRLITLCTVSPFSTSLEYARKLFDQIPQPNIYTWNTLIRAYASSS 102 A MLRTGLFFDP+SASRLIT +SPF SL+YA+++FDQIP PN+YTWNTLIRAYASSS Sbjct: 56 AQMLRTGLFFDPFSASRLITAAALSPFP-SLDYAQQVFDQIPHPNLYTWNTLIRAYASSS 114 Query: 101 DPIQCFFIFNQMLCQCSDLPNKYTFPFLIKAGS 3 +P Q IF +ML Q D P+K+TFPFLIKA S Sbjct: 115 NPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147 >ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa] Length = 738 Score = 121 bits (303), Expect = 7e-26 Identities = 60/93 (64%), Positives = 72/93 (77%) Frame = -2 Query: 281 AHMLRTGLFFDPYSASRLITLCTVSPFSTSLEYARKLFDQIPQPNIYTWNTLIRAYASSS 102 AHMLRTGLFFDP SA++L T C +S S SL+YA K+FDQIP+PN+YTWNTLIRA+ASS Sbjct: 51 AHMLRTGLFFDPPSATKLFTACALSSPS-SLDYACKVFDQIPRPNLYTWNTLIRAFASSP 109 Query: 101 DPIQCFFIFNQMLCQCSDLPNKYTFPFLIKAGS 3 PIQ +F QML + PN YTFPF+IKA + Sbjct: 110 KPIQGLLVFIQMLHESQRFPNSYTFPFVIKAAT 142