BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039558
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
emb|CBI15973.3| unnamed protein product [Vitis vinifera]              131   6e-29
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   131   6e-29
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]   131   6e-29
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26

>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/93 (73%), Positives = 77/93 (82%)
 Frame = -2

Query: 281 AHMLRTGLFFDPYSASRLITLCTVSPFSTSLEYARKLFDQIPQPNIYTWNTLIRAYASSS 102
           A MLRTGLFFDP+SAS+L T   +S FST L+YAR LFDQIPQPN+YTWNTLIRAYASSS
Sbjct: 46  ARMLRTGLFFDPFSASKLFTASALSSFST-LDYARNLFDQIPQPNLYTWNTLIRAYASSS 104

Query: 101 DPIQCFFIFNQMLCQCSDLPNKYTFPFLIKAGS 3
           DP Q F IF  +L +C DLPNK+TFPF+IKA S
Sbjct: 105 DPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAAS 137


>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/93 (69%), Positives = 76/93 (81%)
 Frame = -2

Query: 281 AHMLRTGLFFDPYSASRLITLCTVSPFSTSLEYARKLFDQIPQPNIYTWNTLIRAYASSS 102
           A MLRTGLFFDP+SASRLIT   +SPF  SL+YA+++FDQIP PN+YTWNTLIRAYASSS
Sbjct: 56  AQMLRTGLFFDPFSASRLITAAALSPFP-SLDYAQQVFDQIPHPNLYTWNTLIRAYASSS 114

Query: 101 DPIQCFFIFNQMLCQCSDLPNKYTFPFLIKAGS 3
           +P Q   IF +ML Q  D P+K+TFPFLIKA S
Sbjct: 115 NPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/93 (69%), Positives = 76/93 (81%)
 Frame = -2

Query: 281 AHMLRTGLFFDPYSASRLITLCTVSPFSTSLEYARKLFDQIPQPNIYTWNTLIRAYASSS 102
           A MLRTGLFFDP+SASRLIT   +SPF  SL+YA+++FDQIP PN+YTWNTLIRAYASSS
Sbjct: 56  AQMLRTGLFFDPFSASRLITAAALSPFP-SLDYAQQVFDQIPHPNLYTWNTLIRAYASSS 114

Query: 101 DPIQCFFIFNQMLCQCSDLPNKYTFPFLIKAGS 3
           +P Q   IF +ML Q  D P+K+TFPFLIKA S
Sbjct: 115 NPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/93 (69%), Positives = 76/93 (81%)
 Frame = -2

Query: 281 AHMLRTGLFFDPYSASRLITLCTVSPFSTSLEYARKLFDQIPQPNIYTWNTLIRAYASSS 102
           A MLRTGLFFDP+SASRLIT   +SPF  SL+YA+++FDQIP PN+YTWNTLIRAYASSS
Sbjct: 56  AQMLRTGLFFDPFSASRLITAAALSPFP-SLDYAQQVFDQIPHPNLYTWNTLIRAYASSS 114

Query: 101 DPIQCFFIFNQMLCQCSDLPNKYTFPFLIKAGS 3
           +P Q   IF +ML Q  D P+K+TFPFLIKA S
Sbjct: 115 NPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147


>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/93 (64%), Positives = 72/93 (77%)
 Frame = -2

Query: 281 AHMLRTGLFFDPYSASRLITLCTVSPFSTSLEYARKLFDQIPQPNIYTWNTLIRAYASSS 102
           AHMLRTGLFFDP SA++L T C +S  S SL+YA K+FDQIP+PN+YTWNTLIRA+ASS 
Sbjct: 51  AHMLRTGLFFDPPSATKLFTACALSSPS-SLDYACKVFDQIPRPNLYTWNTLIRAFASSP 109

Query: 101 DPIQCFFIFNQMLCQCSDLPNKYTFPFLIKAGS 3
            PIQ   +F QML +    PN YTFPF+IKA +
Sbjct: 110 KPIQGLLVFIQMLHESQRFPNSYTFPFVIKAAT 142