BLASTX nr result

ID: Coptis21_contig00039554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039554
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   236   2e-60
emb|CBI39785.3| unnamed protein product [Vitis vinifera]              236   2e-60
emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]   236   2e-60
gb|ACU18237.1| unknown [Glycine max]                                  221   5e-56
ref|XP_002298883.1| predicted protein [Populus trichocarpa] gi|2...   220   1e-55

>ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
          Length = 312

 Score =  236 bits (601), Expect = 2e-60
 Identities = 108/150 (72%), Positives = 127/150 (84%)
 Frame = +1

Query: 28  PSSFLLRAAMRISRARWFSFLRRVFHYQNGSRSDLGSNPFSSGSWIALEFLVLVLQINII 207
           PSSFL+R AMRISRARWFSFLRRVFHYQNGSRSDLG+NPF+S +W+ LEF+ LV+QI +I
Sbjct: 14  PSSFLIRTAMRISRARWFSFLRRVFHYQNGSRSDLGANPFNSSTWMILEFIALVVQIGVI 73

Query: 208 SFTLSISKEEKPVWPVRVWILGYDLGCLLSLPLLYWRYRHSNVTQGNDFRLPDVQQDRIY 387
           +FTLS+SK E+PVWP+R+WI+GYD GC+LSL LLYWRY+     QG+ F LPD++Q R  
Sbjct: 74  TFTLSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRNN 133

Query: 388 EESRCSRLANKSRTFLELFFAIWFVMGNVW 477
           EESR S L NK RT LELFFAIWFVMGNVW
Sbjct: 134 EESRSSHLMNKCRTSLELFFAIWFVMGNVW 163


>emb|CBI39785.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  236 bits (601), Expect = 2e-60
 Identities = 108/150 (72%), Positives = 127/150 (84%)
 Frame = +1

Query: 28  PSSFLLRAAMRISRARWFSFLRRVFHYQNGSRSDLGSNPFSSGSWIALEFLVLVLQINII 207
           PSSFL+R AMRISRARWFSFLRRVFHYQNGSRSDLG+NPF+S +W+ LEF+ LV+QI +I
Sbjct: 45  PSSFLIRTAMRISRARWFSFLRRVFHYQNGSRSDLGANPFNSSTWMILEFIALVVQIGVI 104

Query: 208 SFTLSISKEEKPVWPVRVWILGYDLGCLLSLPLLYWRYRHSNVTQGNDFRLPDVQQDRIY 387
           +FTLS+SK E+PVWP+R+WI+GYD GC+LSL LLYWRY+     QG+ F LPD++Q R  
Sbjct: 105 TFTLSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRNN 164

Query: 388 EESRCSRLANKSRTFLELFFAIWFVMGNVW 477
           EESR S L NK RT LELFFAIWFVMGNVW
Sbjct: 165 EESRSSHLMNKCRTSLELFFAIWFVMGNVW 194


>emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
          Length = 343

 Score =  236 bits (601), Expect = 2e-60
 Identities = 108/150 (72%), Positives = 127/150 (84%)
 Frame = +1

Query: 28  PSSFLLRAAMRISRARWFSFLRRVFHYQNGSRSDLGSNPFSSGSWIALEFLVLVLQINII 207
           PSSFL+R AMRISRARWFSFLRRVFHYQNGSRSDLG+NPF+S +W+ LEF+ LV+QI +I
Sbjct: 45  PSSFLIRTAMRISRARWFSFLRRVFHYQNGSRSDLGANPFNSNTWMILEFIALVVQIGVI 104

Query: 208 SFTLSISKEEKPVWPVRVWILGYDLGCLLSLPLLYWRYRHSNVTQGNDFRLPDVQQDRIY 387
           +FTLS+SK E+PVWP+R+WI+GYD GC+LSL LLYWRY+     QG+ F LPD++Q R  
Sbjct: 105 TFTLSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRNN 164

Query: 388 EESRCSRLANKSRTFLELFFAIWFVMGNVW 477
           EESR S L NK RT LELFFAIWFVMGNVW
Sbjct: 165 EESRSSHLMNKCRTSLELFFAIWFVMGNVW 194


>gb|ACU18237.1| unknown [Glycine max]
          Length = 365

 Score =  221 bits (563), Expect = 5e-56
 Identities = 101/152 (66%), Positives = 125/152 (82%)
 Frame = +1

Query: 22  IHPSSFLLRAAMRISRARWFSFLRRVFHYQNGSRSDLGSNPFSSGSWIALEFLVLVLQIN 201
           + P SFL+R AMRISRARWF+FLRRVFHYQNGSRS+LGSNPF+S +W+ LEF+ L+LQI 
Sbjct: 39  VTPPSFLVRIAMRISRARWFTFLRRVFHYQNGSRSNLGSNPFNSSTWMMLEFIALILQIT 98

Query: 202 IISFTLSISKEEKPVWPVRVWILGYDLGCLLSLPLLYWRYRHSNVTQGNDFRLPDVQQDR 381
           I +FTL+ISK E+P+WP+R+W+ GYD+GC+L+L LLY RYR   +TQG+   L D++Q R
Sbjct: 99  ITTFTLAISKRERPIWPMRIWVSGYDIGCVLNLLLLYGRYRQIYLTQGDSLSLSDIEQQR 158

Query: 382 IYEESRCSRLANKSRTFLELFFAIWFVMGNVW 477
             EE+R S L NK RT LELFFAIWFVMGNVW
Sbjct: 159 NNEETRMSHLMNKCRTSLELFFAIWFVMGNVW 190


>ref|XP_002298883.1| predicted protein [Populus trichocarpa] gi|222846141|gb|EEE83688.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  220 bits (560), Expect = 1e-55
 Identities = 107/152 (70%), Positives = 125/152 (82%), Gaps = 3/152 (1%)
 Frame = +1

Query: 31  SSFLLRAAMRISRARWFSFLRRVFHYQNGSRSDLGSNPFSSGSWIALEFLVLVLQINIIS 210
           SS L+R AMRISRARWF+FLRRVFHYQNGSRS+LGSNPF+S  W+ LEF+ LV+QI+I  
Sbjct: 41  SSLLVRTAMRISRARWFTFLRRVFHYQNGSRSNLGSNPFNSSPWMMLEFVALVIQISITM 100

Query: 211 FTLSISKEEKPVWPVRVWILGYDLGCLLSLPLLYWRYRHSNVTQGNDFRLPDVQQDRIYE 390
           FTL+ISK EKPVWPVR+WI+GY++GC+LSL LLY RYR  N TQ + F LPD++Q R  E
Sbjct: 101 FTLAISKAEKPVWPVRIWIIGYNIGCVLSLLLLYGRYRQINTTQADGFGLPDLEQQRGSE 160

Query: 391 ES---RCSRLANKSRTFLELFFAIWFVMGNVW 477
           ES   RCS L +K RT LELFFAIWFVMGNVW
Sbjct: 161 ESSVCRCSILMHKCRTSLELFFAIWFVMGNVW 192


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