BLASTX nr result

ID: Coptis21_contig00039549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039549
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867380.1| predicted protein [Arabidopsis lyrata subsp....   134   8e-30
ref|XP_002283101.1| PREDICTED: origin recognition complex subuni...   130   1e-28
emb|CBI15609.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|NP_194720.2| origin recognition complex protein 5 [Arabidops...   129   2e-28
emb|CAB43666.1| putative protein [Arabidopsis thaliana] gi|72698...   129   2e-28

>ref|XP_002867380.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313216|gb|EFH43639.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 535

 Score =  134 bits (337), Expect = 8e-30
 Identities = 65/103 (63%), Positives = 76/103 (73%)
 Frame = -3

Query: 312 FPGRGVQILEFXXXXXXXXXXXXXXXLYGGTSSGKTSVVLQIFKHLKRPFIYSSFRTCYN 133
           FPGR  QI +F               +YGG S+GKTSVVLQ+ +HL RPF+YSS RTCYN
Sbjct: 54  FPGRRSQIFDFIRLMGPLDCPTLPIMIYGGASTGKTSVVLQVLRHLNRPFVYSSCRTCYN 113

Query: 132 PRLFFESILNRLLHHRKNSGNGYSSAKRCEKPADFVNMVGEAL 4
           PR+ FESILN+LL HRK S NGYSSAKRC+KP+DFVN+V EAL
Sbjct: 114 PRILFESILNQLLLHRKCSSNGYSSAKRCDKPSDFVNLVREAL 156


>ref|XP_002283101.1| PREDICTED: origin recognition complex subunit 5-like [Vitis
           vinifera]
          Length = 541

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/103 (60%), Positives = 77/103 (74%)
 Frame = -3

Query: 312 FPGRGVQILEFXXXXXXXXXXXXXXXLYGGTSSGKTSVVLQIFKHLKRPFIYSSFRTCYN 133
           FPGR +QILE                LYGGTS+GKTS++LQIF+HL RPF+YSS  TCY+
Sbjct: 60  FPGRRIQILELMRLLGPLNSPMLPLFLYGGTSTGKTSIILQIFRHLNRPFVYSSCLTCYS 119

Query: 132 PRLFFESILNRLLHHRKNSGNGYSSAKRCEKPADFVNMVGEAL 4
           PR+ FESI+N+LL HRKN+ NGY+SAKRCE+P+DFV  + EAL
Sbjct: 120 PRILFESIMNQLLLHRKNADNGYASAKRCERPSDFVVSLREAL 162


>emb|CBI15609.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/103 (60%), Positives = 77/103 (74%)
 Frame = -3

Query: 312 FPGRGVQILEFXXXXXXXXXXXXXXXLYGGTSSGKTSVVLQIFKHLKRPFIYSSFRTCYN 133
           FPGR +QILE                LYGGTS+GKTS++LQIF+HL RPF+YSS  TCY+
Sbjct: 59  FPGRRIQILELMRLLGPLNSPMLPLFLYGGTSTGKTSIILQIFRHLNRPFVYSSCLTCYS 118

Query: 132 PRLFFESILNRLLHHRKNSGNGYSSAKRCEKPADFVNMVGEAL 4
           PR+ FESI+N+LL HRKN+ NGY+SAKRCE+P+DFV  + EAL
Sbjct: 119 PRILFESIMNQLLLHRKNADNGYASAKRCERPSDFVVSLREAL 161


>ref|NP_194720.2| origin recognition complex protein 5 [Arabidopsis thaliana]
           gi|49659272|emb|CAE01429.1| origin recognition complex 5
           subunit [Arabidopsis thaliana]
           gi|110742024|dbj|BAE98949.1| hypothetical protein
           [Arabidopsis thaliana] gi|332660292|gb|AEE85692.1|
           origin recognition complex protein 5 [Arabidopsis
           thaliana]
          Length = 534

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/103 (61%), Positives = 75/103 (72%)
 Frame = -3

Query: 312 FPGRGVQILEFXXXXXXXXXXXXXXXLYGGTSSGKTSVVLQIFKHLKRPFIYSSFRTCYN 133
           FPGR  QI +F               +YGG S+GKTSVVLQ+ +HL RPF+YSS RTCYN
Sbjct: 55  FPGRRSQIFDFIRLMGPLDCPTLPIMIYGGASTGKTSVVLQVLRHLNRPFVYSSCRTCYN 114

Query: 132 PRLFFESILNRLLHHRKNSGNGYSSAKRCEKPADFVNMVGEAL 4
           PR+ FESILN+ L HRK S NGYSSAKRC+KP+DFVN++ EAL
Sbjct: 115 PRILFESILNQSLLHRKCSLNGYSSAKRCDKPSDFVNLLREAL 157


>emb|CAB43666.1| putative protein [Arabidopsis thaliana] gi|7269890|emb|CAB79749.1|
           putative protein [Arabidopsis thaliana]
          Length = 554

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/103 (61%), Positives = 75/103 (72%)
 Frame = -3

Query: 312 FPGRGVQILEFXXXXXXXXXXXXXXXLYGGTSSGKTSVVLQIFKHLKRPFIYSSFRTCYN 133
           FPGR  QI +F               +YGG S+GKTSVVLQ+ +HL RPF+YSS RTCYN
Sbjct: 55  FPGRRSQIFDFIRLMGPLDCPTLPIMIYGGASTGKTSVVLQVLRHLNRPFVYSSCRTCYN 114

Query: 132 PRLFFESILNRLLHHRKNSGNGYSSAKRCEKPADFVNMVGEAL 4
           PR+ FESILN+ L HRK S NGYSSAKRC+KP+DFVN++ EAL
Sbjct: 115 PRILFESILNQSLLHRKCSLNGYSSAKRCDKPSDFVNLLREAL 157


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