BLASTX nr result

ID: Coptis21_contig00039543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039543
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171326.1| PREDICTED: gibberellin 2-beta-dioxygenase 8-...    61   8e-08
ref|XP_004142323.1| PREDICTED: gibberellin 2-beta-dioxygenase 8-...    61   8e-08
ref|XP_003540648.1| PREDICTED: gibberellin 2-beta-dioxygenase 8-...    57   2e-06
ref|XP_003538979.1| PREDICTED: gibberellin 2-beta-dioxygenase 8-...    56   3e-06
emb|CBI27476.3| unnamed protein product [Vitis vinifera]               56   3e-06

>ref|XP_004171326.1| PREDICTED: gibberellin 2-beta-dioxygenase 8-like [Cucumis sativus]
          Length = 344

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
 Frame = +1

Query: 34  DSTEKMTDSISHPPLVDQYGSLSHNASQIQCDGN----RSQVIEQCELPLVDLSYLRSRD 201
           ++T  M DS  +PPL DQY  L  + + +Q   N     + V+E+C+LPL+DL  L+S D
Sbjct: 4   ENTTMMMDS--NPPLFDQYEFLLQSTAHLQPFNNGNLPTNSVMEECQLPLIDLKGLKSSD 61

Query: 202 EKKRQXXXXXXXXXXXEWGFFQVV 273
           EK+R            EWGFFQV+
Sbjct: 62  EKERVACRREIFEASEEWGFFQVI 85


>ref|XP_004142323.1| PREDICTED: gibberellin 2-beta-dioxygenase 8-like [Cucumis sativus]
          Length = 340

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
 Frame = +1

Query: 34  DSTEKMTDSISHPPLVDQYGSLSHNASQIQCDGN----RSQVIEQCELPLVDLSYLRSRD 201
           ++T  M DS  +PPL DQY  L  + + +Q   N     + V+E+C+LPL+DL  L+S D
Sbjct: 4   ENTTMMMDS--NPPLFDQYEFLLQSTAHLQPFNNGNLPTNSVMEECQLPLIDLKGLKSSD 61

Query: 202 EKKRQXXXXXXXXXXXEWGFFQVV 273
           EK+R            EWGFFQV+
Sbjct: 62  EKERVACRREIFEASEEWGFFQVI 85


>ref|XP_003540648.1| PREDICTED: gibberellin 2-beta-dioxygenase 8-like [Glycine max]
          Length = 405

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
 Frame = +1

Query: 64  SHPPLVDQYGSLSHNASQIQ----CDGNRSQVIEQCELPLVDLSYLRSRDEKKRQXXXXX 231
           S+PPL+  YG+L  N+ + +     +     +++ C+LPL+DLS L+S +E++R+     
Sbjct: 72  SNPPLMQHYGALVRNSGEAKEATSFNDQNHPLVDACDLPLIDLSGLKSSNERERRACTAA 131

Query: 232 XXXXXXEWGFFQVV 273
                 EWGFFQVV
Sbjct: 132 ICKAASEWGFFQVV 145


>ref|XP_003538979.1| PREDICTED: gibberellin 2-beta-dioxygenase 8-like [Glycine max]
          Length = 338

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
 Frame = +1

Query: 64  SHPPLVDQYGSLSHNASQI-----QCDGNRSQVIEQCELPLVDLSYLRSRDEKKRQXXXX 228
           S+PPLV  YG+L  N+ +        +     +++ C+LPL+DLS L+S +E++R+    
Sbjct: 4   SNPPLVQHYGALVRNSGEEAKKAKSFNDQNHPLVDACDLPLIDLSGLKSSNERERKACTA 63

Query: 229 XXXXXXXEWGFFQVV 273
                  EWGFFQVV
Sbjct: 64  AICKAASEWGFFQVV 78


>emb|CBI27476.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
 Frame = +1

Query: 19  LIRT*DSTEKMTDSISHPPLVDQYGSLSHN----ASQIQCDGNRSQVIEQCELPLVDLSY 186
           L++T D   + T + S+PPL+  YG L  +    A Q +  GN    +E+C+LPL+DL  
Sbjct: 39  LLKTMDVHFRRTMTNSNPPLLQHYGVLCQHGETPAVQQRDCGNNGAAMEECQLPLIDLEG 98

Query: 187 LRSRDEKKRQXXXXXXXXXXXEWGFFQVV 273
           L S  E++R            +WGFFQVV
Sbjct: 99  LWSESEEERLACASAIGRASSKWGFFQVV 127


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