BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039537
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding pr...   135   5e-30
ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding pr...   130   1e-28
ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding pr...   128   6e-28
ref|XP_002519416.1| polyadenylate-binding protein, putative [Ric...   125   5e-27
ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding pr...   112   3e-23

>ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
           vinifera] gi|297740018|emb|CBI30200.3| unnamed protein
           product [Vitis vinifera]
          Length = 634

 Score =  135 bits (339), Expect = 5e-30
 Identities = 69/103 (66%), Positives = 84/103 (81%)
 Frame = +3

Query: 3   GSGSQEVEMXXXXXXXXXPQQQKNILGERLYPLVEKLQFDLASKITGMILEMDNTELILL 182
           G+GSQ  EM         P+QQK ILGE LYPLV+K + DLA+KITGM+LEMDN+EL+LL
Sbjct: 532 GTGSQGSEMLSSMLAAASPEQQKQILGEHLYPLVQKQKPDLAAKITGMLLEMDNSELLLL 591

Query: 183 LDSPESLAAKVDEAVQVLKRSKTKAAGQEVLHPNYLSTEVAVN 311
           L+SPESLAAKV+EAVQVLK SK+K +GQ+ LHP+YL+ EVAVN
Sbjct: 592 LESPESLAAKVEEAVQVLKLSKSKPSGQDTLHPSYLAAEVAVN 634


>ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 632

 Score =  130 bits (326), Expect = 1e-28
 Identities = 69/103 (66%), Positives = 80/103 (77%)
 Frame = +3

Query: 3   GSGSQEVEMXXXXXXXXXPQQQKNILGERLYPLVEKLQFDLASKITGMILEMDNTELILL 182
           G GSQ  EM         P+QQK ILGE LY LV KL+  LA+KITGM+LEMDN EL+LL
Sbjct: 530 GRGSQGSEMLHSMLAGAAPEQQKEILGEHLYMLVHKLKPTLAAKITGMLLEMDNGELLLL 589

Query: 183 LDSPESLAAKVDEAVQVLKRSKTKAAGQEVLHPNYLSTEVAVN 311
           L+SPESL+AKV+EAVQVLK SKTK +GQ+VLH N+LS EVAVN
Sbjct: 590 LESPESLSAKVEEAVQVLKNSKTKVSGQDVLHSNFLSAEVAVN 632


>ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 636

 Score =  128 bits (321), Expect = 6e-28
 Identities = 68/101 (67%), Positives = 79/101 (78%)
 Frame = +3

Query: 9   GSQEVEMXXXXXXXXXPQQQKNILGERLYPLVEKLQFDLASKITGMILEMDNTELILLLD 188
           GSQ  EM         P+QQK ILGE LY LV KL+  LA+KITGM+LEMDN EL+LLL+
Sbjct: 536 GSQGSEMLHSLLAGAAPEQQKEILGEHLYMLVHKLKPTLAAKITGMLLEMDNGELLLLLE 595

Query: 189 SPESLAAKVDEAVQVLKRSKTKAAGQEVLHPNYLSTEVAVN 311
           SPESL+AKV+EAVQVLK SKTK +GQ+VLH N+LS EVAVN
Sbjct: 596 SPESLSAKVEEAVQVLKNSKTKVSGQDVLHSNFLSAEVAVN 636


>ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223541279|gb|EEF42830.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 632

 Score =  125 bits (313), Expect = 5e-27
 Identities = 68/104 (65%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   GSGSQEVEMXXXXXXXXXPQQQKNILGERLYPLVEKLQFDLASKITGMILEMDNTELILL 182
           G  SQ  E+         P +QK ILGE+LYPLV K + DL +KITGM+LEMDN+EL+LL
Sbjct: 529 GPVSQGSEVLSSMLAAASPDEQKQILGEQLYPLVRKHKPDLVAKITGMLLEMDNSELLLL 588

Query: 183 LDSPESLAAKVDEAVQVLKRS-KTKAAGQEVLHPNYLSTEVAVN 311
           L+SPESLAAKV+EAVQVLK S KTK +GQ+ LHPNYLS EVAVN
Sbjct: 589 LESPESLAAKVEEAVQVLKISNKTKVSGQDTLHPNYLSAEVAVN 632


>ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Cucumis sativus] gi|449521207|ref|XP_004167621.1|
           PREDICTED: probable polyadenylate-binding protein
           At2g36660-like [Cucumis sativus]
          Length = 640

 Score =  112 bits (280), Expect = 3e-23
 Identities = 62/103 (60%), Positives = 77/103 (74%)
 Frame = +3

Query: 3   GSGSQEVEMXXXXXXXXXPQQQKNILGERLYPLVEKLQFDLASKITGMILEMDNTELILL 182
           G  SQ  ++         P QQK ILGE LYPLV+K + DLA+KITGM+LEMDN+EL+LL
Sbjct: 540 GDVSQGSQILSSMLASSPPDQQKQILGEHLYPLVQKRKPDLAAKITGMLLEMDNSELLLL 599

Query: 183 LDSPESLAAKVDEAVQVLKRSKTKAAGQEVLHPNYLSTEVAVN 311
           L+SPESLAAKV+EAVQVLK SKTK + Q+ L  ++L  E+AVN
Sbjct: 600 LESPESLAAKVEEAVQVLKISKTKLSNQDTL--SFLPAELAVN 640