BLASTX nr result

ID: Coptis21_contig00039518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039518
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/58 (44%), Positives = 38/58 (65%)
 Frame = -1

Query: 187 ILSFLPMEDVVRTCILSRKWRDICSSLSHLEFNCPDFRSAKVFKNFVDCFLITHGRFE 14
           ILSFLP +D + TCILS+ WR++  SLS+ +F+   ++S  +F NF+D F   H   E
Sbjct: 29  ILSFLPTKDALCTCILSKSWRELWRSLSNFDFDDRTWKSKIIFGNFMDRFCYLHNSRE 86


Top