BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039515
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat...   116   2e-24
emb|CBI20176.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat...   112   4e-23
ref|XP_002338346.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002317451.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23

>ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Cucumis sativus]
          Length = 527

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/80 (72%), Positives = 65/80 (81%)
 Frame = +3

Query: 42  ISPFRLSTLLRNEKNPNLALQLFQNPNPGPTPSTKPFRYSLLSYDLIITKLARAKMFTEL 221
           ISPFRLS+LLR +K+P LALQLF NPNP  +   KPFRYSLLSYDLII+KL RAKMF E+
Sbjct: 75  ISPFRLSSLLRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRAKMFDEM 134

Query: 222 ETILTQLNQETRFTPKEIIF 281
           E IL QL QETRF P E+IF
Sbjct: 135 EEILQQLKQETRFAPHEVIF 154


>emb|CBI20176.3| unnamed protein product [Vitis vinifera]
          Length = 146

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/80 (71%), Positives = 67/80 (83%)
 Frame = +3

Query: 42  ISPFRLSTLLRNEKNPNLALQLFQNPNPGPTPSTKPFRYSLLSYDLIITKLARAKMFTEL 221
           ISPFRLS+LLR + +P LALQLFQNPNP P    KPFRY+ LSYDLIITKL R++MF E+
Sbjct: 7   ISPFRLSSLLRLQNDPKLALQLFQNPNPDP----KPFRYTHLSYDLIITKLGRSRMFHEM 62

Query: 222 ETILTQLNQETRFTPKEIIF 281
           E IL+QL +ETRF+PKEIIF
Sbjct: 63  EQILSQLRRETRFSPKEIIF 82


>ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Vitis vinifera]
          Length = 464

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/80 (71%), Positives = 67/80 (83%)
 Frame = +3

Query: 42  ISPFRLSTLLRNEKNPNLALQLFQNPNPGPTPSTKPFRYSLLSYDLIITKLARAKMFTEL 221
           ISPFRLS+LLR + +P LALQLFQNPNP P    KPFRY+ LSYDLIITKL R++MF E+
Sbjct: 7   ISPFRLSSLLRLQNDPKLALQLFQNPNPDP----KPFRYTHLSYDLIITKLGRSRMFHEM 62

Query: 222 ETILTQLNQETRFTPKEIIF 281
           E IL+QL +ETRF+PKEIIF
Sbjct: 63  EQILSQLRRETRFSPKEIIF 82


>ref|XP_002338346.1| predicted protein [Populus trichocarpa] gi|222871947|gb|EEF09078.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/80 (72%), Positives = 68/80 (85%)
 Frame = +3

Query: 42  ISPFRLSTLLRNEKNPNLALQLFQNPNPGPTPSTKPFRYSLLSYDLIITKLARAKMFTEL 221
           I+PFRL++LLR +K+P LALQLF+NPNP  TPS KPFRYSLLSYDLIITKL RAKMF E+
Sbjct: 7   ITPFRLASLLRLQKDPKLALQLFKNPNP-KTPS-KPFRYSLLSYDLIITKLGRAKMFNEM 64

Query: 222 ETILTQLNQETRFTPKEIIF 281
           + IL QL +ET FTPKE +F
Sbjct: 65  QEILAQLKEETLFTPKEALF 84


>ref|XP_002317451.1| predicted protein [Populus trichocarpa] gi|222860516|gb|EEE98063.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/80 (72%), Positives = 68/80 (85%)
 Frame = +3

Query: 42  ISPFRLSTLLRNEKNPNLALQLFQNPNPGPTPSTKPFRYSLLSYDLIITKLARAKMFTEL 221
           I+PFRL++LLR +K+P LALQLF+NPNP  TPS KPFRYSLLSYDLIITKL RAKMF E+
Sbjct: 7   ITPFRLASLLRLQKDPKLALQLFKNPNP-KTPS-KPFRYSLLSYDLIITKLGRAKMFNEM 64

Query: 222 ETILTQLNQETRFTPKEIIF 281
           + IL QL +ET FTPKE +F
Sbjct: 65  QEILAQLKEETLFTPKEALF 84