BLASTX nr result

ID: Coptis21_contig00039496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039496
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565829.1| TPX2 (targeting protein for Xklp2)-like protein...    77   1e-12
ref|XP_002881415.1| hypothetical protein ARALYDRAFT_482558 [Arab...    75   6e-12
ref|XP_002314647.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
gb|ABK93119.1| unknown [Populus trichocarpa]                           75   6e-12
ref|NP_001239708.1| uncharacterized protein LOC100797456 [Glycin...    74   1e-11

>ref|NP_565829.1| TPX2 (targeting protein for Xklp2)-like protein [Arabidopsis
           thaliana] gi|16209720|gb|AAL14415.1| At2g35880/F11F19.21
           [Arabidopsis thaliana] gi|20197995|gb|AAD21469.2|
           expressed protein [Arabidopsis thaliana]
           gi|22655282|gb|AAM98231.1| unknown protein [Arabidopsis
           thaliana] gi|330254079|gb|AEC09173.1| TPX2 (targeting
           protein for Xklp2)-like protein [Arabidopsis thaliana]
          Length = 432

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
 Frame = +1

Query: 1   EETDKLKKCSTFKASPLPSFYHRKDPPPKTELKKVPVTRPKSPQLGRR-SKSTSEGINTN 177
           EE  +L+K  TFKA P+PSFY  K+PPPK ELKK+P TRPKSP+LGRR S S + G    
Sbjct: 288 EEIKRLRKSLTFKAGPMPSFY--KEPPPKVELKKIPTTRPKSPKLGRRKSSSDATGGEAA 345

Query: 178 KEEKKKSDSRIISITAKEKI----QNLFKSAWSAPSSQQNRKLKTSSSISRG 321
               K  DS   S T K+ I      L     S  + ++ +K+K   +  RG
Sbjct: 346 PRVTKPKDSS--SSTVKKPITKSQPKLETQEKSVKAKEKKKKVKKEEAEKRG 395


>ref|XP_002881415.1| hypothetical protein ARALYDRAFT_482558 [Arabidopsis lyrata subsp.
           lyrata] gi|297327254|gb|EFH57674.1| hypothetical protein
           ARALYDRAFT_482558 [Arabidopsis lyrata subsp. lyrata]
          Length = 433

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 47/115 (40%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
 Frame = +1

Query: 1   EETDKLKKCSTFKASPLPSFYHRKDPPPKTELKKVPVTRPKSPQLGRR-SKSTSEGINTN 177
           EE  +L+K  TFKA P+PSFY  K+PPPK ELKK+P TRPKSP+LGRR S S + G    
Sbjct: 288 EEIKRLRKSLTFKAGPMPSFY--KEPPPKVELKKIPTTRPKSPKLGRRKSSSDATGGEAA 345

Query: 178 KEEKKKSDSRIISITAKEKIQNLFKSAWSAPSSQQNRKLKTSSSISRGSRMGKEV 342
               K  DS                S    P ++   KL+T     +     KEV
Sbjct: 346 PRVTKPKDSS--------------SSTLKKPITKSQPKLETQEKSVKAKEKKKEV 386


>ref|XP_002314647.1| predicted protein [Populus trichocarpa] gi|222863687|gb|EEF00818.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/91 (46%), Positives = 58/91 (63%)
 Frame = +1

Query: 13  KLKKCSTFKASPLPSFYHRKDPPPKTELKKVPVTRPKSPQLGRRSKSTSEGINTNKEEKK 192
           +L+K   FKASP+PSFYH + PPPK ELKK+P TR KSP+LGRR KS S G+N+++ ++ 
Sbjct: 285 QLRKSLMFKASPMPSFYH-EGPPPKVELKKLPPTRAKSPKLGRR-KSCSNGVNSSQPDRV 342

Query: 193 KSDSRIISITAKEKIQNLFKSAWSAPSSQQN 285
           K            + Q +F+   S P SQ +
Sbjct: 343 KGACG----DGNNQSQGIFREDTSNPVSQHS 369


>gb|ABK93119.1| unknown [Populus trichocarpa]
          Length = 404

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/91 (46%), Positives = 58/91 (63%)
 Frame = +1

Query: 13  KLKKCSTFKASPLPSFYHRKDPPPKTELKKVPVTRPKSPQLGRRSKSTSEGINTNKEEKK 192
           +L+K   FKASP+PSFYH + PPPK ELKK+P TR KSP+LGRR KS S G+N+++ ++ 
Sbjct: 280 QLRKSLMFKASPMPSFYH-EGPPPKVELKKLPPTRAKSPKLGRR-KSCSNGVNSSQPDRV 337

Query: 193 KSDSRIISITAKEKIQNLFKSAWSAPSSQQN 285
           K            + Q +F+   S P SQ +
Sbjct: 338 KGACG----DGNNQSQGIFREDTSNPVSQHS 364


>ref|NP_001239708.1| uncharacterized protein LOC100797456 [Glycine max]
           gi|255647775|gb|ACU24348.1| unknown [Glycine max]
          Length = 388

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/65 (56%), Positives = 49/65 (75%)
 Frame = +1

Query: 1   EETDKLKKCSTFKASPLPSFYHRKDPPPKTELKKVPVTRPKSPQLGRRSKSTSEGINTNK 180
           E   +L+K  TFKASP+PSFYH + PPPK ELKK+P TR KSP+LGRR KS +  +N ++
Sbjct: 272 EAIKQLRKSLTFKASPMPSFYH-EGPPPKVELKKLPATRAKSPKLGRR-KSNNGAVNLSE 329

Query: 181 EEKKK 195
            +K+K
Sbjct: 330 GDKEK 334


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