BLASTX nr result

ID: Coptis21_contig00039483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039483
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204...    64   1e-08
dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606...    64   1e-08
gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like p...    62   6e-08
ref|XP_004153592.1| PREDICTED: uncharacterized protein LOC101219...    60   2e-07
ref|XP_003622970.1| Pantothenate synthetase [Medicago truncatula...    60   2e-07

>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
          Length = 282

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
 Frame = -3

Query: 297 TCVVCGQSEGTECHLFYECSFAQYVWNEML------HRIGYRRTGVVEWEDELEWVFDVC 136
           +C++CG +  +  HLF+ C F   +W+ +L      HR GY       W  EL W+++  
Sbjct: 167 SCLLCGGNYESRDHLFFSCHFGWEIWSRILLLKSSSHRTGY-------WGVELSWIYNQG 219

Query: 135 IGKGCQKDAFRLCINAYFYWVWNERNARIFENRYRVGQQVVDLI 4
           IGK  ++  +RL   A  Y++W ERN R+     R    V  LI
Sbjct: 220 IGKSVRRKLWRLLWCATIYFIWQERNHRLHGGSIREPLVVFQLI 263


>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
           orf147a [Beta vulgaris subsp. vulgaris]
          Length = 147

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/84 (35%), Positives = 47/84 (55%)
 Frame = -3

Query: 294 CVVCGQSEGTECHLFYECSFAQYVWNEMLHRIGYRRTGVVEWEDELEWVFDVCIGKGCQK 115
           CV+CG  + T  HLF+ C F+  +W+ +L  +G +RT   +W+  L+     C       
Sbjct: 43  CVLCGNVDETRDHLFFVCEFSYEIWSSLLCWLGIQRT-AGDWQGVLQSAH--CQSNSSAS 99

Query: 114 DAFRLCINAYFYWVWNERNARIFE 43
             FR+CI+   Y++W ERNAR F+
Sbjct: 100 CIFRMCISIAVYFIWRERNARKFQ 123


>gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like protein, related
           [Medicago truncatula]
          Length = 196

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/97 (29%), Positives = 47/97 (48%)
 Frame = -3

Query: 294 CVVCGQSEGTECHLFYECSFAQYVWNEMLHRIGYRRTGVVEWEDELEWVFDVCIGKGCQK 115
           CV+C +   T  HLF+ C +A  VW  ++  +         W   L+++   C       
Sbjct: 78  CVLCTKENETHSHLFFSCDYADAVWKGVMRWMNMT-VNTSNWHSILQYIQSHCNSNNGMH 136

Query: 114 DAFRLCINAYFYWVWNERNARIFENRYRVGQQVVDLI 4
            A R+ ++   Y +W ERN R F+N YR  QQ+++ I
Sbjct: 137 QAHRMVLSETLYVIWKERNDRKFQNCYRSVQQLLNQI 173


>ref|XP_004153592.1| PREDICTED: uncharacterized protein LOC101219214 [Cucumis sativus]
          Length = 152

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
 Frame = -3

Query: 297 TCVVCGQSEGTECHLFYECSFAQYVWNEML------HRIGYRRTGVVEWEDELEWVFDVC 136
           +C++CG +  +  HLF+ C F   +W+ +L       RIGY       W  EL W+ +  
Sbjct: 37  SCLLCGWNYESRDHLFFSCHFGWEIWSRILLLMSSSQRIGY-------WGVELSWICNQG 89

Query: 135 IGKGCQKDAFRLCINAYFYWVWNERNARIFENRYRVGQQVVDLI 4
           IGK  ++  + L   A  Y++W ERN R+     R    V  LI
Sbjct: 90  IGKSVRRKLWHLLWCATIYFIWQERNHRLHGGAVREPMVVFQLI 133


>ref|XP_003622970.1| Pantothenate synthetase [Medicago truncatula]
           gi|355497985|gb|AES79188.1| Pantothenate synthetase
           [Medicago truncatula]
          Length = 551

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
 Frame = -3

Query: 297 TCVVCGQSEGTECHLFYECSFAQYVWNEMLHRIGYRRTGVVEWED------ELEWVFDVC 136
           TCV+CGQ E +  HLF  C  A  +W            GV+ W D       L   F+  
Sbjct: 294 TCVLCGQREESSTHLFLHCEVAAKIWR-----------GVLNWLDMFITPQNLYVHFESW 342

Query: 135 IGKGCQK---DAFRLCINAYFYWVWNERNARIFENRYRVGQQVVDLI 4
            G+   K     FRL  +A  + +W ERNA+IF+N+++   +++D I
Sbjct: 343 NGEATSKRLLKGFRLIWHATIWLIWKERNAKIFKNQFKEVDEIIDEI 389


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