BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039476
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621546.1| F-box protein [Medicago truncatula] gi|35549...    73   2e-11
gb|ABD33346.2| F-box protein interaction domain [Medicago trunca...    73   2e-11
ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...    70   2e-10
gb|ABR18788.1| class S F-box protein [Nicotiana alata]                 69   5e-10
gb|AFK37781.1| unknown [Lotus japonicus]                               67   1e-09

>ref|XP_003621546.1| F-box protein [Medicago truncatula] gi|355496561|gb|AES77764.1|
           F-box protein [Medicago truncatula]
          Length = 334

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 18/158 (11%)
 Frame = -3

Query: 454 PITRDYLIPPTS-----PMVDYRPLGNGFGFDSLHNEYKVIRILRRESCLKTTGDMAA-- 296
           P T+++ + PTS     P +D   L +GFG+D + N+YK+IR +    C K   D+ +  
Sbjct: 126 PTTQEFKVIPTSSFEFVPHMDVDILRHGFGYDCVTNDYKIIRQV--VCCQKLDIDVLSLG 183

Query: 295 --------EVFTLGSDSWREITTNVPFINFMKQRNVLVNGCLHWVAYVGSNEGKRAILSF 140
                   E+++L S+SWR++  ++P  +  K   VL++G +HW       + +  +LSF
Sbjct: 184 NIDDDQFWEIYSLHSNSWRKLEYDIPLNH--KDNGVLLDGMVHWWNESDDVDDEAYLLSF 241

Query: 139 NVDTEQFDVIQMPTKEGSYLDSY---DLMVLGGHLCVM 35
           ++ TE+F     P ++GS    +   DLMVL G L ++
Sbjct: 242 DLSTEEFVTTVAPLEDGSLDLEFVLSDLMVLNGSLALI 279


>gb|ABD33346.2| F-box protein interaction domain [Medicago truncatula]
          Length = 269

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 18/158 (11%)
 Frame = -3

Query: 454 PITRDYLIPPTS-----PMVDYRPLGNGFGFDSLHNEYKVIRILRRESCLKTTGDMAA-- 296
           P T+++ + PTS     P +D   L +GFG+D + N+YK+IR +    C K   D+ +  
Sbjct: 61  PTTQEFKVIPTSSFEFVPHMDVDILRHGFGYDCVTNDYKIIRQV--VCCQKLDIDVLSLG 118

Query: 295 --------EVFTLGSDSWREITTNVPFINFMKQRNVLVNGCLHWVAYVGSNEGKRAILSF 140
                   E+++L S+SWR++  ++P  +  K   VL++G +HW       + +  +LSF
Sbjct: 119 NIDDDQFWEIYSLHSNSWRKLEYDIPLNH--KDNGVLLDGMVHWWNESDDVDDEAYLLSF 176

Query: 139 NVDTEQFDVIQMPTKEGSYLDSY---DLMVLGGHLCVM 35
           ++ TE+F     P ++GS    +   DLMVL G L ++
Sbjct: 177 DLSTEEFVTTVAPLEDGSLDLEFVLSDLMVLNGSLALI 214


>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449511918|ref|XP_004164088.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 391

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
 Frame = -3

Query: 388 GFGFDSLHNEYKVIRILRRES---CLKTTGDMAAEVFTLGSDSWREITTNVPFINFMKQR 218
           GFGFDS  N++K++R++  E              E++ L + SWR+IT + P    +K +
Sbjct: 152 GFGFDSRANDFKLVRLVYIEGGPPVYDYELPPRVELYQLSTGSWRQITDSAPCYEILKSQ 211

Query: 217 --NVLVNGCLHWVAYVGSNEGKR-AILSFNVDTEQFDVIQMP-TKEGSYLDSYDLMVLGG 50
              + +N  +HW+A++ S  G R  IL F++D E F  I +P      +  +  + +LGG
Sbjct: 212 WTQIFMNEAVHWIAFIRSRRGFRCVILRFHMDGEYFSTIPLPDCLVNEFPQNLKVAMLGG 271

Query: 49  HLCVM 35
            LCV+
Sbjct: 272 ELCVL 276


>gb|ABR18788.1| class S F-box protein [Nicotiana alata]
          Length = 395

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
 Frame = -3

Query: 454 PITRDY-LIPPT---SPMVDYRPL-GNGFGFDSLHNEYKVIRI--LRRES--CLKTTGDM 302
           P +R+Y L+ P+   SP+  +R + G  FG+DS+ NEYK++RI  +R E   C  +  + 
Sbjct: 134 PTSRNYRLLQPSPFGSPLGFHRSINGIAFGYDSIANEYKIVRIAEVRGEPPFCCFSVREW 193

Query: 301 AAEVFTLGSDSWREITT---NVPFINFMKQRNVLVNGCLHWVAYVGSNEGKRAILSFNVD 131
             E++ L  DSWRE+      +P++++     +   G  HW      N     IL F++ 
Sbjct: 194 RVEIYELSIDSWREVDNVDQQLPYVHWNPCAELFYKGASHWF----GNTNTVVILCFDMS 249

Query: 130 TEQFDVIQMP-TKEGSYLDSYDLMVLGGHLCVM 35
           TE F  I+MP T    Y   Y L+V+   L ++
Sbjct: 250 TETFRNIKMPDTCHSKYRKRYGLLVMNDSLTLI 282


>gb|AFK37781.1| unknown [Lotus japonicus]
          Length = 489

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
 Frame = -3

Query: 454 PITRDYL-IPPTSPM-----VDYRPLGNGFGFDSLHNEYKVIRILRRESCLKTTGDMAAE 293
           PIT +++ +P TS +        + +  GFGF   +NEYKV+RILR        G MAAE
Sbjct: 200 PITGEFIRLPQTSRIGKTNKFSIQEIYAGFGFQPKNNEYKVVRILRGLQFYH--GIMAAE 257

Query: 292 VFTLGSDSWREITTNVPFINFMKQRNVLVNGCLHWVAYVGSNEGKRAILSFNVDTEQFDV 113
           V TLG+ +WR +  N  +   ++     V+G LHW   +GS  G  +IL F+ ++E+F  
Sbjct: 258 VHTLGTSTWRNVEVNSMYFYHLR-FPTCVSGALHW---IGSYHGTLSILCFDFESERFRS 313

Query: 112 IQMP 101
              P
Sbjct: 314 FPTP 317