BLASTX nr result
ID: Coptis21_contig00039464
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039464 (372 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2... 176 2e-42 emb|CBI31329.3| unnamed protein product [Vitis vinifera] 174 7e-42 ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi... 174 7e-42 emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera] 172 2e-41 ref|XP_002528032.1| pentatricopeptide repeat-containing protein,... 169 2e-40 >ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa] Length = 683 Score = 176 bits (446), Expect = 2e-42 Identities = 82/121 (67%), Positives = 100/121 (82%) Frame = -2 Query: 371 ATLIAACRIHGNTDIGEWAAEKLVEMRPNKSGYYVLIANMYAVAGRWNKLAHVRTLMRNS 192 ATL+ ACRIHGNT+IGEWAAEKL+EM+P GYYVLIANM+A AGRW+KLA VRT MR+ Sbjct: 554 ATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYVLIANMHAAAGRWSKLAEVRTYMRDL 613 Query: 191 GVRKAPGCTWIDVGNGFHPFVVQDTRNSNVLEIYRLLHGMSKLMKEAGYIATEEDFTLDD 12 GVRKAPGCTW+DVG+GF PFVV DT N ++Y LL G++ LMK+AGY+A E+F+ +D Sbjct: 614 GVRKAPGCTWVDVGSGFSPFVVGDTSKHNSNDLYELLEGLTDLMKDAGYVA-GENFSSED 672 Query: 11 E 9 E Sbjct: 673 E 673 >emb|CBI31329.3| unnamed protein product [Vitis vinifera] Length = 753 Score = 174 bits (441), Expect = 7e-42 Identities = 84/122 (68%), Positives = 97/122 (79%) Frame = -2 Query: 371 ATLIAACRIHGNTDIGEWAAEKLVEMRPNKSGYYVLIANMYAVAGRWNKLAHVRTLMRNS 192 ATLI ACRIH NT+IGEWAAEKL+EM+P GYYVLIANMYA AG WNKLA VR MR+ Sbjct: 567 ATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDL 626 Query: 191 GVRKAPGCTWIDVGNGFHPFVVQDTRNSNVLEIYRLLHGMSKLMKEAGYIATEEDFTLDD 12 GVRKAPGC W+DVG GF PF+V DT N+N EIY LL G++ +MKEAGYI++ EDF D Sbjct: 627 GVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVMKEAGYISS-EDFGSGD 685 Query: 11 ES 6 E+ Sbjct: 686 ET 687 >ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71490-like [Vitis vinifera] Length = 748 Score = 174 bits (441), Expect = 7e-42 Identities = 84/122 (68%), Positives = 97/122 (79%) Frame = -2 Query: 371 ATLIAACRIHGNTDIGEWAAEKLVEMRPNKSGYYVLIANMYAVAGRWNKLAHVRTLMRNS 192 ATLI ACRIH NT+IGEWAAEKL+EM+P GYYVLIANMYA AG WNKLA VR MR+ Sbjct: 612 ATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDL 671 Query: 191 GVRKAPGCTWIDVGNGFHPFVVQDTRNSNVLEIYRLLHGMSKLMKEAGYIATEEDFTLDD 12 GVRKAPGC W+DVG GF PF+V DT N+N EIY LL G++ +MKEAGYI++ EDF D Sbjct: 672 GVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVMKEAGYISS-EDFGSGD 730 Query: 11 ES 6 E+ Sbjct: 731 ET 732 >emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera] Length = 822 Score = 172 bits (437), Expect = 2e-41 Identities = 83/122 (68%), Positives = 97/122 (79%) Frame = -2 Query: 371 ATLIAACRIHGNTDIGEWAAEKLVEMRPNKSGYYVLIANMYAVAGRWNKLAHVRTLMRNS 192 ATLI ACRIH NT+IGEWAAEKL+EM+P GYYVLIANMYA AG WNKLA VR MR+ Sbjct: 686 ATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRXFMRDL 745 Query: 191 GVRKAPGCTWIDVGNGFHPFVVQDTRNSNVLEIYRLLHGMSKLMKEAGYIATEEDFTLDD 12 GVRKAPGC W+DVG GF PF+V DT N+N EIY LL G++ ++KEAGYI++ EDF D Sbjct: 746 GVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVIKEAGYISS-EDFGSGD 804 Query: 11 ES 6 E+ Sbjct: 805 ET 806 >ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 730 Score = 169 bits (428), Expect = 2e-40 Identities = 78/120 (65%), Positives = 96/120 (80%) Frame = -2 Query: 371 ATLIAACRIHGNTDIGEWAAEKLVEMRPNKSGYYVLIANMYAVAGRWNKLAHVRTLMRNS 192 ATL+ ACRIHGN +IGEWAAEKL+EMRP SGYYVLIANMYA AG W+KLA VRT MR+ Sbjct: 605 ATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYMRDL 664 Query: 191 GVRKAPGCTWIDVGNGFHPFVVQDTRNSNVLEIYRLLHGMSKLMKEAGYIATEEDFTLDD 12 GVRKAPGC W+DVG+GF PF+V DT +V ++Y LL G+++LMK+A Y+ E ++DD Sbjct: 665 GVRKAPGCAWVDVGSGFFPFLVDDTSKPHVNKLYPLLEGLTELMKDAEYVGKENVGSVDD 724