BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039464
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
emb|CBI31329.3| unnamed protein product [Vitis vinifera]              174   7e-42
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...   174   7e-42
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]   172   2e-41
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   169   2e-40

>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/121 (67%), Positives = 100/121 (82%)
 Frame = -2

Query: 371 ATLIAACRIHGNTDIGEWAAEKLVEMRPNKSGYYVLIANMYAVAGRWNKLAHVRTLMRNS 192
           ATL+ ACRIHGNT+IGEWAAEKL+EM+P   GYYVLIANM+A AGRW+KLA VRT MR+ 
Sbjct: 554 ATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYVLIANMHAAAGRWSKLAEVRTYMRDL 613

Query: 191 GVRKAPGCTWIDVGNGFHPFVVQDTRNSNVLEIYRLLHGMSKLMKEAGYIATEEDFTLDD 12
           GVRKAPGCTW+DVG+GF PFVV DT   N  ++Y LL G++ LMK+AGY+A  E+F+ +D
Sbjct: 614 GVRKAPGCTWVDVGSGFSPFVVGDTSKHNSNDLYELLEGLTDLMKDAGYVA-GENFSSED 672

Query: 11  E 9
           E
Sbjct: 673 E 673


>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  174 bits (441), Expect = 7e-42
 Identities = 84/122 (68%), Positives = 97/122 (79%)
 Frame = -2

Query: 371 ATLIAACRIHGNTDIGEWAAEKLVEMRPNKSGYYVLIANMYAVAGRWNKLAHVRTLMRNS 192
           ATLI ACRIH NT+IGEWAAEKL+EM+P   GYYVLIANMYA AG WNKLA VR  MR+ 
Sbjct: 567 ATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDL 626

Query: 191 GVRKAPGCTWIDVGNGFHPFVVQDTRNSNVLEIYRLLHGMSKLMKEAGYIATEEDFTLDD 12
           GVRKAPGC W+DVG GF PF+V DT N+N  EIY LL G++ +MKEAGYI++ EDF   D
Sbjct: 627 GVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVMKEAGYISS-EDFGSGD 685

Query: 11  ES 6
           E+
Sbjct: 686 ET 687


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  174 bits (441), Expect = 7e-42
 Identities = 84/122 (68%), Positives = 97/122 (79%)
 Frame = -2

Query: 371 ATLIAACRIHGNTDIGEWAAEKLVEMRPNKSGYYVLIANMYAVAGRWNKLAHVRTLMRNS 192
           ATLI ACRIH NT+IGEWAAEKL+EM+P   GYYVLIANMYA AG WNKLA VR  MR+ 
Sbjct: 612 ATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDL 671

Query: 191 GVRKAPGCTWIDVGNGFHPFVVQDTRNSNVLEIYRLLHGMSKLMKEAGYIATEEDFTLDD 12
           GVRKAPGC W+DVG GF PF+V DT N+N  EIY LL G++ +MKEAGYI++ EDF   D
Sbjct: 672 GVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVMKEAGYISS-EDFGSGD 730

Query: 11  ES 6
           E+
Sbjct: 731 ET 732


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  172 bits (437), Expect = 2e-41
 Identities = 83/122 (68%), Positives = 97/122 (79%)
 Frame = -2

Query: 371  ATLIAACRIHGNTDIGEWAAEKLVEMRPNKSGYYVLIANMYAVAGRWNKLAHVRTLMRNS 192
            ATLI ACRIH NT+IGEWAAEKL+EM+P   GYYVLIANMYA AG WNKLA VR  MR+ 
Sbjct: 686  ATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRXFMRDL 745

Query: 191  GVRKAPGCTWIDVGNGFHPFVVQDTRNSNVLEIYRLLHGMSKLMKEAGYIATEEDFTLDD 12
            GVRKAPGC W+DVG GF PF+V DT N+N  EIY LL G++ ++KEAGYI++ EDF   D
Sbjct: 746  GVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVIKEAGYISS-EDFGSGD 804

Query: 11   ES 6
            E+
Sbjct: 805  ET 806


>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/120 (65%), Positives = 96/120 (80%)
 Frame = -2

Query: 371 ATLIAACRIHGNTDIGEWAAEKLVEMRPNKSGYYVLIANMYAVAGRWNKLAHVRTLMRNS 192
           ATL+ ACRIHGN +IGEWAAEKL+EMRP  SGYYVLIANMYA AG W+KLA VRT MR+ 
Sbjct: 605 ATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYMRDL 664

Query: 191 GVRKAPGCTWIDVGNGFHPFVVQDTRNSNVLEIYRLLHGMSKLMKEAGYIATEEDFTLDD 12
           GVRKAPGC W+DVG+GF PF+V DT   +V ++Y LL G+++LMK+A Y+  E   ++DD
Sbjct: 665 GVRKAPGCAWVDVGSGFFPFLVDDTSKPHVNKLYPLLEGLTELMKDAEYVGKENVGSVDD 724