BLASTX nr result

ID: Coptis21_contig00039444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039444
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534087.1| zinc finger protein, putative [Ricinus commu...   131   5e-29
ref|XP_002273296.1| PREDICTED: zinc finger protein 2-like [Vitis...   125   5e-27
ref|XP_002329648.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
emb|CAN80869.1| hypothetical protein VITISV_038605 [Vitis vinifera]   108   4e-22
ref|XP_003543747.1| PREDICTED: zinc finger protein 2-like [Glyci...   102   3e-20

>ref|XP_002534087.1| zinc finger protein, putative [Ricinus communis]
           gi|223525873|gb|EEF28297.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 155

 Score =  131 bits (330), Expect = 5e-29
 Identities = 70/123 (56%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   SPSEPRVFSCNYCQRKFHSSQALGGHQNAHKLERTLAKRNRELSSALRPHGGSNNHRSRS 181
           SP+EPRVFSCNYCQRKF+SSQALGGHQNAHKLERTLAK++RELSSA+R HGG    +S S
Sbjct: 40  SPAEPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSAVRAHGG----KSGS 95

Query: 182 STDDVSNHSEQVQPPI-YHRHAGRFGSEVNYGRREMSYGLGERENLWGTNYRSDNVNKED 358
           S+    NH  + QP   +H H GRF  +++YGRR+           W   YR +NV  E 
Sbjct: 96  SSTSGLNHVRRNQPGFEHHGHGGRFIDDMSYGRRDS----------WSMGYRPENVQDEF 145

Query: 359 FNQ 367
            NQ
Sbjct: 146 NNQ 148


>ref|XP_002273296.1| PREDICTED: zinc finger protein 2-like [Vitis vinifera]
          Length = 154

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/98 (63%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   SPSEPRVFSCNYCQRKFHSSQALGGHQNAHKLERTLAKRNRELSSALRPHGGSNNHRSRS 181
           SP+EPRVFSCNYCQRKF+SSQALGGHQNAHKLERTLAK++RELSSA+RPHGG N   + S
Sbjct: 37  SPAEPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSAVRPHGGPNQRSNAS 96

Query: 182 STDDVSNHSEQVQPPIYHRHAGRFGSEVNYGRR-EMSY 292
            T       + V    +  HAGRF ++++YG R EM+Y
Sbjct: 97  GTGLFRRTQQPVVGFEHQGHAGRFQNDMSYGARIEMNY 134


>ref|XP_002329648.1| predicted protein [Populus trichocarpa] gi|222870529|gb|EEF07660.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  112 bits (279), Expect = 4e-23
 Identities = 62/118 (52%), Positives = 76/118 (64%)
 Frame = +2

Query: 2   SPSEPRVFSCNYCQRKFHSSQALGGHQNAHKLERTLAKRNRELSSALRPHGGSNNHRSRS 181
           SP+EPR+FSCNYCQRKF+SSQALGGHQNAHKLERTLAK++RE+SS++R HGGSN      
Sbjct: 34  SPAEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREMSSSVRAHGGSN------ 87

Query: 182 STDDVSNHSEQVQPPIYHRHAGRFGSEVNYGRREMSYGLGERENLWGTNYRSDNVNKE 355
                         P Y R      +E+NYG RE   G+G     W   YR++NV +E
Sbjct: 88  --------------PRYGR------TEMNYGSRE---GIG---GSWSMVYRTENVQEE 119


>emb|CAN80869.1| hypothetical protein VITISV_038605 [Vitis vinifera]
          Length = 198

 Score =  108 bits (270), Expect = 4e-22
 Identities = 62/130 (47%), Positives = 75/130 (57%), Gaps = 33/130 (25%)
 Frame = +2

Query: 2   SPSEPRVFSCNYCQ--------------------------------RKFHSSQALGGHQN 85
           SP+EPRVFSCNYCQ                                RKF+SSQALGGHQN
Sbjct: 49  SPAEPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSARKFYSSQALGGHQN 108

Query: 86  AHKLERTLAKRNRELSSALRPHGGSNNHRSRSSTDDVSNHSEQVQPPIYHRHAGRFGSEV 265
           AHKLERTLAK++RELSSA+RPHGG N   + S T       + V    +  HAGRF +++
Sbjct: 109 AHKLERTLAKKSRELSSAVRPHGGPNQRSNASGTGLFRRTQQPVVGFEHQGHAGRFQNDM 168

Query: 266 NYGRR-EMSY 292
           +YG R EM+Y
Sbjct: 169 SYGARIEMNY 178


>ref|XP_003543747.1| PREDICTED: zinc finger protein 2-like [Glycine max]
          Length = 164

 Score =  102 bits (254), Expect = 3e-20
 Identities = 63/130 (48%), Positives = 82/130 (63%), Gaps = 8/130 (6%)
 Frame = +2

Query: 2   SPSEPRVFSCNYCQRKFHSSQALGGHQNAHKLERTLAKRNRELSSALRPHG--------G 157
           SP EPR+FSCNYCQRKF+SSQALGGHQNAHKLERTLAK++RELSS ++ +G        G
Sbjct: 41  SPVEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSNMQSYGSPEQRSNFG 100

Query: 158 SNNHRSRSSTDDVSNHSEQVQPPIYHRHAGRFGSEVNYGRREMSYGLGERENLWGTNYRS 337
           +++H  R +   V N  +      Y R  GR   E +YG +E   G+G   + W   Y S
Sbjct: 101 ASHHLGR-ALGVVDNQGQS-----YARLGGR--KEFSYGSKE---GVGVASS-WSRGYTS 148

Query: 338 DNVNKEDFNQ 367
           ++V +ED  Q
Sbjct: 149 EHV-QEDMGQ 157


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