BLASTX nr result

ID: Coptis21_contig00039429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039429
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303679.1| predicted protein [Populus trichocarpa] gi|2...   169   6e-40
ref|XP_004146200.1| PREDICTED: transcription factor bHLH157-like...   150   2e-34
emb|CBI34563.3| unnamed protein product [Vitis vinifera]              149   8e-34
emb|CAN74602.1| hypothetical protein VITISV_028112 [Vitis vinifera]   149   8e-34
ref|XP_003535397.1| PREDICTED: uncharacterized protein LOC100813...   133   4e-29

>ref|XP_002303679.1| predicted protein [Populus trichocarpa] gi|222841111|gb|EEE78658.1|
           predicted protein [Populus trichocarpa]
          Length = 831

 Score =  169 bits (428), Expect = 6e-40
 Identities = 79/136 (58%), Positives = 104/136 (76%)
 Frame = +1

Query: 355 MSTRIGEVLKNLSCNNGWSYGLFWSVDRQNSMLLTIDDAYFGETFGMDINNMLQQVRVLG 534
           M   + E LK+L C+NGWSYG+FW  D++NSMLLT++DAY+ E  G+ +NNML + R+LG
Sbjct: 1   MGLVLKEKLKSLCCSNGWSYGVFWCFDQRNSMLLTMEDAYYEEEMGVVVNNMLSEARMLG 60

Query: 535 EGIVGEAACTGKHQWLFSDTFCLEWGPMGSVTNQNVFQDISEFNRQFSSGIKTIALITLA 714
           EGIVG+AA TGKHQW+FSD     W    S+  Q++FQD SE +RQFSSGIKTIA+I++ 
Sbjct: 61  EGIVGQAASTGKHQWIFSDASDGGWNSAASIGGQDIFQDDSEIHRQFSSGIKTIAVISVE 120

Query: 715 PHGIMQFGSTEKIRES 762
             G++QFGST+KI ES
Sbjct: 121 SQGLVQFGSTQKILES 136


>ref|XP_004146200.1| PREDICTED: transcription factor bHLH157-like [Cucumis sativus]
          Length = 772

 Score =  150 bits (380), Expect = 2e-34
 Identities = 72/135 (53%), Positives = 95/135 (70%)
 Frame = +1

Query: 361 TRIGEVLKNLSCNNGWSYGLFWSVDRQNSMLLTIDDAYFGETFGMDINNMLQQVRVLGEG 540
           T +G VL  + C+N WSYG+FWS DR+NSMLLT++D ++ E   +   NMLQQV +LGEG
Sbjct: 4   TELGSVLNRICCSNHWSYGVFWSFDRRNSMLLTLEDIWYEEQVVLVAANMLQQVHMLGEG 63

Query: 541 IVGEAACTGKHQWLFSDTFCLEWGPMGSVTNQNVFQDISEFNRQFSSGIKTIALITLAPH 720
           ++G AA TGKHQW+FSD    EW       N ++FQD  E  +QFS G+KT+A+I + PH
Sbjct: 64  VIGTAAFTGKHQWIFSDASNGEW-------NSSMFQDNLELQQQFSYGVKTVAVIPVHPH 116

Query: 721 GIMQFGSTEKIRESL 765
           G++Q GST KI ESL
Sbjct: 117 GVIQLGSTHKIWESL 131


>emb|CBI34563.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  149 bits (375), Expect = 8e-34
 Identities = 71/139 (51%), Positives = 100/139 (71%), Gaps = 1/139 (0%)
 Frame = +1

Query: 352 RMSTRIGEVLKNLSCNNGWSYGLFWSVDRQNSMLLTIDDAYFGETFGMDINNMLQQVRVL 531
           +M + + + LK+L C+NGW+YG+FW  D +NSMLLT +DAY+ E  G+ I++ML +V  L
Sbjct: 6   KMESVLKKTLKSLCCSNGWTYGVFWRFDERNSMLLTSEDAYYDEQMGVVIDSMLSKVHTL 65

Query: 532 GEGIVGEAACTGKHQWLFSDTFCLEWGPMGSVTNQNVFQDISEFNRQFSSG-IKTIALIT 708
            EGI+G+ A TGKH W+FSD    EW  + S+  +++ QD SE +RQFSSG IKTIA+I 
Sbjct: 66  REGIIGQVAFTGKHCWVFSDAQSGEWNSLCSIDGEDISQDDSEIHRQFSSGIIKTIAVIP 125

Query: 709 LAPHGIMQFGSTEKIRESL 765
           + P G++QFGS +KI E L
Sbjct: 126 VEPRGVVQFGSNQKIVERL 144


>emb|CAN74602.1| hypothetical protein VITISV_028112 [Vitis vinifera]
          Length = 893

 Score =  149 bits (375), Expect = 8e-34
 Identities = 71/139 (51%), Positives = 100/139 (71%), Gaps = 1/139 (0%)
 Frame = +1

Query: 352 RMSTRIGEVLKNLSCNNGWSYGLFWSVDRQNSMLLTIDDAYFGETFGMDINNMLQQVRVL 531
           +M + + + LK+L C+NGW+YG+FW  D +NSMLLT +DAY+ E  G+ I++ML +V  L
Sbjct: 6   KMESVLKKTLKSLCCSNGWTYGVFWRFDERNSMLLTSEDAYYDEQMGVVIDSMLSKVHTL 65

Query: 532 GEGIVGEAACTGKHQWLFSDTFCLEWGPMGSVTNQNVFQDISEFNRQFSSG-IKTIALIT 708
            EGI+G+ A TGKH W+FSD    EW  + S+  +++ QD SE +RQFSSG IKTIA+I 
Sbjct: 66  REGIIGQVAFTGKHCWVFSDAQSGEWNSLCSIDGEDISQDDSEIHRQFSSGIIKTIAVIP 125

Query: 709 LAPHGIMQFGSTEKIRESL 765
           + P G++QFGS +KI E L
Sbjct: 126 VEPRGVVQFGSNQKIVERL 144


>ref|XP_003535397.1| PREDICTED: uncharacterized protein LOC100813558 [Glycine max]
          Length = 797

 Score =  133 bits (335), Expect = 4e-29
 Identities = 66/130 (50%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
 Frame = +1

Query: 379 LKNL-SCNNGWSYGLFWSVDRQNSMLLTIDDAYFGETFGMDINNMLQQVRVLGEGIVGEA 555
           LK L +C +GWSY +FW    +NS+LLT+++AY+ E  G +I NM  QV +LGEGIVGEA
Sbjct: 9   LKTLCTCGDGWSYAIFWRFHPRNSLLLTVEEAYYEEHLGEEIANMHPQVHLLGEGIVGEA 68

Query: 556 ACTGKHQWLFSDTFCLEWGPMGSVTNQNVFQDISEFNRQFSSGIKTIALITLAPHGIMQF 735
           A TGKH W+ SD    +W    ++T QN+ +D SEF +QFSSGIKTI ++ +   G++QF
Sbjct: 69  ASTGKHSWVHSDGQTHDW----NLTGQNICEDDSEFQQQFSSGIKTIVVVPVKAWGVVQF 124

Query: 736 GSTEKIRESL 765
           GS +KI E +
Sbjct: 125 GSRKKILEKV 134


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