BLASTX nr result

ID: Coptis21_contig00039427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039427
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73868.1| hypothetical protein VITISV_001274 [Vitis vinifera]    67   2e-09
ref|XP_003590798.1| Defensin/CCP-like protein [Medicago truncatu...    64   1e-08
emb|CAN65999.1| hypothetical protein VITISV_007696 [Vitis vinifera]    62   6e-08
gb|AAF81293.1|AC027656_10 Strong similarity to a mutator-like tr...    60   1e-07
dbj|BAB11264.1| unnamed protein product [Arabidopsis thaliana]         60   1e-07

>emb|CAN73868.1| hypothetical protein VITISV_001274 [Vitis vinifera]
          Length = 786

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/69 (39%), Positives = 44/69 (63%)
 Frame = +1

Query: 1   LVHTIADLFPFAEHKMCARHIYANFRKTYPGAQLKSIFWESTKSSTPQAFDKVMAKMNAI 180
           LV T  DL P AEH+ C RH++ANF+K +PG  LK   W + +++T  +FD  M ++  +
Sbjct: 576 LVETFKDLMPNAEHRFCVRHLHANFKKDFPGKXLKDAMWSAARATTKNSFDFHMDELKKL 635

Query: 181 DFRAKDHIM 207
           D +A + ++
Sbjct: 636 DVKAYEWLV 644


>ref|XP_003590798.1| Defensin/CCP-like protein [Medicago truncatula]
            gi|355479846|gb|AES61049.1| Defensin/CCP-like protein
            [Medicago truncatula]
          Length = 1176

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 25/68 (36%), Positives = 46/68 (67%)
 Frame = +1

Query: 1    LVHTIADLFPFAEHKMCARHIYANFRKTYPGAQLKSIFWESTKSSTPQAFDKVMAKMNAI 180
            LV  I +L    EH++C +H+YANF+K YPG  L+ +FW + +++T  A+++ M +M  I
Sbjct: 1092 LVPAIQNLGSHVEHRLCVKHLYANFKKRYPGLDLREVFWMAARATTVPAWERAMNRMKLI 1151

Query: 181  DFRAKDHI 204
            + +A +++
Sbjct: 1152 NDKAWEYM 1159


>emb|CAN65999.1| hypothetical protein VITISV_007696 [Vitis vinifera]
          Length = 632

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/69 (36%), Positives = 42/69 (60%)
 Frame = +1

Query: 1   LVHTIADLFPFAEHKMCARHIYANFRKTYPGAQLKSIFWESTKSSTPQAFDKVMAKMNAI 180
           LV T  DL P AEH+ C RH++ NF+K +P   LK   W + +++T  +FD  M ++  +
Sbjct: 385 LVETFKDLMPNAEHRFCVRHLHXNFKKDFPXKVLKDAMWSAARATTKNSFDFHMDELKKL 444

Query: 181 DFRAKDHIM 207
           D +A + ++
Sbjct: 445 DVKAYEWLV 453


>gb|AAF81293.1|AC027656_10 Strong similarity to a mutator-like transposase from Arabidopsis
           thaliana gb|AC006067. It contains a zinc finger, CCHC
           class domain PF|00098 [Arabidopsis thaliana]
          Length = 753

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
 Frame = +1

Query: 1   LVHTIADLFPFAEHKMCARHIYANFRKTYPG-AQLKSIFWESTKSSTPQAFDKVMAKMNA 177
           L++ I ++ P+AEH+MCARHI+AN +K Y     L  +FW+  ++     F K + KM  
Sbjct: 387 LIYAIKNVLPYAEHRMCARHIFANLQKRYKQMGPLHKVFWKCARAYNETVFWKQLEKMKT 446

Query: 178 IDFRAKDHI 204
           I F A D +
Sbjct: 447 IKFEAYDEV 455


>dbj|BAB11264.1| unnamed protein product [Arabidopsis thaliana]
          Length = 733

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
 Frame = +1

Query: 1   LVHTIADLFPFAEHKMCARHIYANFRKTYPG-AQLKSIFWESTKSSTPQAFDKVMAKMNA 177
           L++ I ++ P+AEH+MCARHI+AN +K Y     L  +FW+  ++     F K + KM  
Sbjct: 367 LIYAIKNVLPYAEHRMCARHIFANLQKRYKQMGPLHKVFWKCARAYNETVFWKQLEKMKT 426

Query: 178 IDFRAKDHI 204
           I F A D +
Sbjct: 427 IKFEAYDEV 435


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