BLASTX nr result

ID: Coptis21_contig00039405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039405
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD15106.1| hypothetical protein [Nicotiana tabacum]               66   3e-09
ref|XP_002529221.1| leucine-rich repeat-containing protein, puta...    65   4e-09
ref|XP_002265429.1| PREDICTED: putative disease resistance prote...    65   7e-09
ref|XP_002267579.2| PREDICTED: putative disease resistance prote...    64   2e-08
dbj|BAJ97829.1| predicted protein [Hordeum vulgare subsp. vulgare]     64   2e-08

>dbj|BAD15106.1| hypothetical protein [Nicotiana tabacum]
          Length = 789

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
 Frame = +1

Query: 13  FFQSLYGSNQFLRTHLFLGSCEYIIPSHIIFERL----HCLRALDLTTTGIKLLPASIGN 180
           F +  Y  +  LRT ++L    Y + S+   ER+     CLR L L    IK+LP S+G 
Sbjct: 274 FPEPFYAKHMKLRTFIYLNGSPYSVMSNSTLERMLASFKCLRVLHLCHLQIKILPQSLGG 333

Query: 181 LKCLRYLNLSKTELMVLPESISRLVNLQML 270
           LK LRYL +S   ++ LP SI++L NLQ+L
Sbjct: 334 LKHLRYLAISSRSIVTLPNSITKLHNLQVL 363


>ref|XP_002529221.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223531339|gb|EEF33177.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 386

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
 Frame = +1

Query: 46  LRTHLFLGSCEYIIPS--HIIFERLHCLRALDLTTTGIKLLPASIGNLKCLRYLNLSKTE 219
           +R+ LF G   Y I    H +FE+L  LR LDL+ T I  LP+SIGN K LR+L+LS T 
Sbjct: 231 VRSLLFFGGYRYNIKKIPHDLFEKLKSLRTLDLSHTSITELPSSIGNSKHLRFLDLSWTC 290

Query: 220 LMVLPESISRLVNLQML 270
           + +LP++I  L NLQ L
Sbjct: 291 IQILPDTICSLCNLQTL 307


>ref|XP_002265429.1| PREDICTED: putative disease resistance protein At3g14460 [Vitis
           vinifera]
          Length = 1322

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
 Frame = +1

Query: 7   SRFFQSLYGSNQFLRTHLF--LGSCEYIIP--SHIIFERLHCLRALDLTTTGIKLLPASI 174
           ++ F ++Y    FL   L+  L S  Y+    SH +   L CLR L L+   IK LP SI
Sbjct: 545 AKLFLNIYNLRTFLPLPLYSNLLSTLYLSKEISHCLLSTLRCLRVLSLSHYDIKELPHSI 604

Query: 175 GNLKCLRYLNLSKTELMVLPESISRLVNLQML 270
            NLK LRYL+LS T +  LPESI+ L NLQ L
Sbjct: 605 ENLKHLRYLDLSHTRIRTLPESITTLFNLQTL 636


>ref|XP_002267579.2| PREDICTED: putative disease resistance protein At3g14460-like
           [Vitis vinifera]
          Length = 1324

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/60 (58%), Positives = 40/60 (66%)
 Frame = +1

Query: 91  SHIIFERLHCLRALDLTTTGIKLLPASIGNLKCLRYLNLSKTELMVLPESISRLVNLQML 270
           SH +   L CLR L LT  GIK LP SIGNLK LRYL+LS   +  LP+SI+ L NLQ L
Sbjct: 577 SHCLLSTLMCLRVLSLTYYGIKDLPHSIGNLKHLRYLDLSHNLVRTLPKSITTLFNLQTL 636


>dbj|BAJ97829.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1086

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/76 (43%), Positives = 47/76 (61%)
 Frame = +1

Query: 46  LRTHLFLGSCEYIIPSHIIFERLHCLRALDLTTTGIKLLPASIGNLKCLRYLNLSKTELM 225
           LR+ +   S    +  +++ E   CLR LDL+ T I+ LP S+G L+ LRYLNL  T++ 
Sbjct: 556 LRSLMLFNSPNVRVIDNLLLESATCLRVLDLSKTAIEALPKSVGTLRHLRYLNLDGTQVS 615

Query: 226 VLPESISRLVNLQMLT 273
            LP S+  LVNLQ L+
Sbjct: 616 DLPSSVGFLVNLQTLS 631


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