BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039397
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155400.1| PREDICTED: DNA polymerase lambda-like, parti...   134   8e-30
ref|XP_004135473.1| PREDICTED: DNA polymerase lambda-like [Cucum...   134   8e-30
ref|XP_002266446.2| PREDICTED: DNA polymerase lambda-like [Vitis...   129   2e-28
emb|CBI32097.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_003613736.1| DNA polymerase beta [Medicago truncatula] gi...   128   6e-28

>ref|XP_004155400.1| PREDICTED: DNA polymerase lambda-like, partial [Cucumis sativus]
          Length = 400

 Score =  134 bits (337), Expect = 8e-30
 Identities = 71/127 (55%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
 Frame = -1

Query: 417 MAPKKKGRKKEVSKNPSLETDEHGMFEGMVVYFVENGVQSRRLQIWKEKLVLMGATVEDQ 238
           MAPK++       K+ SL  D HGMF GMVV+ VE GVQ+RRLQIWK+KLV MGA++E++
Sbjct: 1   MAPKRR-------KSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEER 53

Query: 237 ISKVVTHIFVLDLKTLLQ-VGNEHLMRFKGSILLYQWLEESLKSGEKVSEGLYNLKTQMG 61
           +SK+V+HIF   L  LL+ V    L RFKG +L YQWLE+SL SGEK SE LY +K    
Sbjct: 54  LSKMVSHIFASSLDALLEKVDGARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKV--- 110

Query: 60  GVDERGK 40
           G+DE G+
Sbjct: 111 GLDEDGR 117


>ref|XP_004135473.1| PREDICTED: DNA polymerase lambda-like [Cucumis sativus]
          Length = 521

 Score =  134 bits (337), Expect = 8e-30
 Identities = 71/127 (55%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
 Frame = -1

Query: 417 MAPKKKGRKKEVSKNPSLETDEHGMFEGMVVYFVENGVQSRRLQIWKEKLVLMGATVEDQ 238
           MAPK++       K+ SL  D HGMF GMVV+ VE GVQ+RRLQIWK+KLV MGA++E++
Sbjct: 1   MAPKRR-------KSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEER 53

Query: 237 ISKVVTHIFVLDLKTLLQ-VGNEHLMRFKGSILLYQWLEESLKSGEKVSEGLYNLKTQMG 61
           +SK+V+HIF   L  LL+ V    L RFKG +L YQWLE+SL SGEK SE LY +K    
Sbjct: 54  LSKMVSHIFASSLDALLEKVDGARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKV--- 110

Query: 60  GVDERGK 40
           G+DE G+
Sbjct: 111 GLDEDGR 117


>ref|XP_002266446.2| PREDICTED: DNA polymerase lambda-like [Vitis vinifera]
          Length = 543

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/132 (52%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -1

Query: 417 MAPKKKGRKKEVSKNPSLETDEHGMFEGMVVYFVENGVQSRRLQIWKEKLVLMGATVEDQ 238
           MAPK K       K+ +  +D +GMF GMVV+ VE GVQ+RRL+IWK+KLV MGAT+ D+
Sbjct: 1   MAPKAK-------KSRAPTSDPNGMFAGMVVFLVEYGVQTRRLEIWKQKLVQMGATIADR 53

Query: 237 ISKVVTHIFVLDLKTLL-QVGNEHLMRFKGSILLYQWLEESLKSGEKVSEGLYNLKTQMG 61
           +SK V+H+F ++   LL QVG EHL RF+G++L YQWLE+SL+ GEK+SE  YNLK    
Sbjct: 54  LSKRVSHVFAVNRDALLRQVGREHLERFQGNVLQYQWLEDSLRLGEKISEDSYNLKFDSE 113

Query: 60  GVDERGKSLKYF 25
             D  G + + F
Sbjct: 114 VQDGPGNTSEIF 125


>emb|CBI32097.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/132 (52%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -1

Query: 417 MAPKKKGRKKEVSKNPSLETDEHGMFEGMVVYFVENGVQSRRLQIWKEKLVLMGATVEDQ 238
           MAPK K       K+ +  +D +GMF GMVV+ VE GVQ+RRL+IWK+KLV MGAT+ D+
Sbjct: 1   MAPKAK-------KSRAPTSDPNGMFAGMVVFLVEYGVQTRRLEIWKQKLVQMGATIADR 53

Query: 237 ISKVVTHIFVLDLKTLL-QVGNEHLMRFKGSILLYQWLEESLKSGEKVSEGLYNLKTQMG 61
           +SK V+H+F ++   LL QVG EHL RF+G++L YQWLE+SL+ GEK+SE  YNLK    
Sbjct: 54  LSKRVSHVFAVNRDALLRQVGREHLERFQGNVLQYQWLEDSLRLGEKISEDSYNLKFDSE 113

Query: 60  GVDERGKSLKYF 25
             D  G + + F
Sbjct: 114 VQDGPGNTSEIF 125


>ref|XP_003613736.1| DNA polymerase beta [Medicago truncatula]
           gi|355515071|gb|AES96694.1| DNA polymerase beta
           [Medicago truncatula]
          Length = 531

 Score =  128 bits (321), Expect = 6e-28
 Identities = 66/113 (58%), Positives = 86/113 (76%), Gaps = 3/113 (2%)
 Frame = -1

Query: 363 ETDEHGMFEGMVVYFVENGVQSRRLQIWKEKLVLMGATVEDQISKVVTHIFVLDLKTLL- 187
           + +++GMF GMVV+FV  GVQ+RRLQIWK+++V MGA +ED+ SK VTH+F +D  TLL 
Sbjct: 4   KAEQNGMFSGMVVFFVSKGVQARRLQIWKQRMVQMGAVIEDRFSKRVTHVFAVDSHTLLH 63

Query: 186 QVGNEHLMRFKGSILLYQWLEESLKSGEKVSEGLYNLK--TQMGGVDERGKSL 34
           +  ++ L RFKGS+LLYQWLE+SLKSGEK SE LY LK   Q  G++E   SL
Sbjct: 64  EFDSQRLSRFKGSLLLYQWLEDSLKSGEKESEDLYVLKLDPQGEGINEIDTSL 116