BLASTX nr result
ID: Coptis21_contig00039380
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039380 (260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI22579.3| unnamed protein product [Vitis vinifera] 55 8e-06 ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis v... 55 8e-06 ref|NP_200103.1| timeless family protein [Arabidopsis thaliana] ... 55 8e-06 >emb|CBI22579.3| unnamed protein product [Vitis vinifera] Length = 1217 Score = 54.7 bits (130), Expect = 8e-06 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Frame = -2 Query: 259 INTDSIMNELGKLKKETGNW-ETGDDVEMVPSEDIGRKHRSIADSLGDDEADVTAS-KPT 86 I + S+++ELG LKKE+G W E+ +E G HRSIAD+LG+DEADV S +P Sbjct: 800 ITSQSLLHELGSLKKESGKWGNISRHGEIGSTEGKGWMHRSIADALGEDEADVVISHEPV 859 Query: 85 YVASSQTDNEKD 50 Y + +E + Sbjct: 860 YQKNDDNFSEAE 871 >ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis vinifera] Length = 1269 Score = 54.7 bits (130), Expect = 8e-06 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Frame = -2 Query: 259 INTDSIMNELGKLKKETGNW-ETGDDVEMVPSEDIGRKHRSIADSLGDDEADVTAS-KPT 86 I + S+++ELG LKKE+G W E+ +E G HRSIAD+LG+DEADV S +P Sbjct: 786 ITSQSLLHELGSLKKESGKWGNISRHGEIGSTEGKGWMHRSIADALGEDEADVVISHEPV 845 Query: 85 YVASSQTDNEKD 50 Y + +E + Sbjct: 846 YQKNDDNFSEAE 857 >ref|NP_200103.1| timeless family protein [Arabidopsis thaliana] gi|10177105|dbj|BAB10439.1| unnamed protein product [Arabidopsis thaliana] gi|332008894|gb|AED96277.1| timeless family protein [Arabidopsis thaliana] Length = 1141 Score = 54.7 bits (130), Expect = 8e-06 Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Frame = -2 Query: 259 INTDSIMNELGKLKKETGNWETGDDVEMV-PSEDIGRKHRSIADSLGDDEADVTASKPTY 83 IN + +++ELG L+K+ GN E E S D G HRS+AD+LGDDEADV S Sbjct: 766 INAEYMLHELGHLRKQMGNQEKFSGTEEFGTSSDKGWAHRSLADALGDDEADVVISYDQG 825 Query: 82 VASSQTDNEKD----PYRAKRRKV 23 + D +D P + KRR V Sbjct: 826 FQNEDDDMVEDKSAGPSKRKRRLV 849