BLASTX nr result

ID: Coptis21_contig00039380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039380
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22579.3| unnamed protein product [Vitis vinifera]               55   8e-06
ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis v...    55   8e-06
ref|NP_200103.1| timeless family protein [Arabidopsis thaliana] ...    55   8e-06

>emb|CBI22579.3| unnamed protein product [Vitis vinifera]
          Length = 1217

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = -2

Query: 259  INTDSIMNELGKLKKETGNW-ETGDDVEMVPSEDIGRKHRSIADSLGDDEADVTAS-KPT 86
            I + S+++ELG LKKE+G W       E+  +E  G  HRSIAD+LG+DEADV  S +P 
Sbjct: 800  ITSQSLLHELGSLKKESGKWGNISRHGEIGSTEGKGWMHRSIADALGEDEADVVISHEPV 859

Query: 85   YVASSQTDNEKD 50
            Y  +    +E +
Sbjct: 860  YQKNDDNFSEAE 871


>ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis vinifera]
          Length = 1269

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = -2

Query: 259  INTDSIMNELGKLKKETGNW-ETGDDVEMVPSEDIGRKHRSIADSLGDDEADVTAS-KPT 86
            I + S+++ELG LKKE+G W       E+  +E  G  HRSIAD+LG+DEADV  S +P 
Sbjct: 786  ITSQSLLHELGSLKKESGKWGNISRHGEIGSTEGKGWMHRSIADALGEDEADVVISHEPV 845

Query: 85   YVASSQTDNEKD 50
            Y  +    +E +
Sbjct: 846  YQKNDDNFSEAE 857


>ref|NP_200103.1| timeless family protein [Arabidopsis thaliana]
            gi|10177105|dbj|BAB10439.1| unnamed protein product
            [Arabidopsis thaliana] gi|332008894|gb|AED96277.1|
            timeless family protein [Arabidopsis thaliana]
          Length = 1141

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
 Frame = -2

Query: 259  INTDSIMNELGKLKKETGNWETGDDVEMV-PSEDIGRKHRSIADSLGDDEADVTASKPTY 83
            IN + +++ELG L+K+ GN E     E    S D G  HRS+AD+LGDDEADV  S    
Sbjct: 766  INAEYMLHELGHLRKQMGNQEKFSGTEEFGTSSDKGWAHRSLADALGDDEADVVISYDQG 825

Query: 82   VASSQTDNEKD----PYRAKRRKV 23
              +   D  +D    P + KRR V
Sbjct: 826  FQNEDDDMVEDKSAGPSKRKRRLV 849


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