BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039372
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24302.3| unnamed protein product [Vitis vinifera]              103   2e-20
emb|CAN73311.1| hypothetical protein VITISV_018159 [Vitis vinifera]   102   2e-20
ref|NP_200728.2| pentatricopeptide repeat-containing protein [Ar...    95   5e-18
ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arab...    93   3e-17
ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17

>emb|CBI24302.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/93 (51%), Positives = 65/93 (69%)
 Frame = -2

Query: 281 GLLVEAEAFMKNMPVEPDQTVLGALVNACKFHGNEKILENVSRRLVGASGVGGGTYTLLS 102
           GLL EAEAF++ MP+E +  + GAL+NACK HGNEK+   + + L  A GV  GT  LLS
Sbjct: 428 GLLEEAEAFIRGMPMEAEGPIWGALLNACKIHGNEKMFGRIDQSLRNAKGVSIGTLALLS 487

Query: 101 NIYSNFNRWTEAYHVRDIMGCIGVRKDPGCSWV 3
           N Y++ NRW +A  VRD+M  +G++K  GCSW+
Sbjct: 488 NTYASSNRWDDANKVRDMMRDMGLKKMSGCSWI 520


>emb|CAN73311.1| hypothetical protein VITISV_018159 [Vitis vinifera]
          Length = 725

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/93 (51%), Positives = 65/93 (69%)
 Frame = -2

Query: 281 GLLVEAEAFMKNMPVEPDQTVLGALVNACKFHGNEKILENVSRRLVGASGVGGGTYTLLS 102
           GLL EAEAF++ MP+E +  + GAL+NACK HGNEK+   + + L  A GV  GT  LLS
Sbjct: 362 GLLEEAEAFIRGMPMEAEGPIWGALLNACKIHGNEKMFGXIBQSLRNAKGVSIGTLALLS 421

Query: 101 NIYSNFNRWTEAYHVRDIMGCIGVRKDPGCSWV 3
           N Y++ NRW +A  VRD+M  +G++K  GCSW+
Sbjct: 422 NTYASSNRWDDANKVRDMMRDMGLKKMSGCSWI 454


>ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g59200, chloroplastic; Flags: Precursor
           gi|9759241|dbj|BAB09765.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009773|gb|AED97156.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 544

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/94 (43%), Positives = 64/94 (68%)
 Frame = -2

Query: 284 VGLLVEAEAFMKNMPVEPDQTVLGALVNACKFHGNEKILENVSRRLVGASGVGGGTYTLL 105
           VG L EA  F++N+P+EPD  +LG L++ACK HGN ++ E +++RL  +     GTY LL
Sbjct: 405 VGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLL 464

Query: 104 SNIYSNFNRWTEAYHVRDIMGCIGVRKDPGCSWV 3
           SN+Y++  +W E+  +R+ M   G+ K+PGCS +
Sbjct: 465 SNLYASSGKWKESTEIRESMRDSGIEKEPGCSTI 498


>ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
           lyrata] gi|297310446|gb|EFH40870.1| hypothetical protein
           ARALYDRAFT_496037 [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/94 (44%), Positives = 64/94 (68%)
 Frame = -2

Query: 284 VGLLVEAEAFMKNMPVEPDQTVLGALVNACKFHGNEKILENVSRRLVGASGVGGGTYTLL 105
           VG L EA  F++NM +EPD  +LGAL++ACK HGN ++ E +++RL  +     GTY LL
Sbjct: 395 VGRLEEAYRFIENMLIEPDHIMLGALLSACKIHGNMELGEKIAKRLFESENPDSGTYVLL 454

Query: 104 SNIYSNFNRWTEAYHVRDIMGCIGVRKDPGCSWV 3
           S+IY++  +W E+  +R+ M   G+ K+PGCS +
Sbjct: 455 SHIYASSGKWKESTEIRESMRESGIEKEPGCSTI 488


>ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like, partial [Cucumis sativus]
          Length = 472

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/93 (50%), Positives = 62/93 (66%)
 Frame = -2

Query: 281 GLLVEAEAFMKNMPVEPDQTVLGALVNACKFHGNEKILENVSRRLVGASGVGGGTYTLLS 102
           GLL EAEAF+K MP+E +  V GAL++AC+ HGNEK  E V   L+G+ GV  GT+ LLS
Sbjct: 370 GLLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLS 429

Query: 101 NIYSNFNRWTEAYHVRDIMGCIGVRKDPGCSWV 3
           N Y+  +RW +A  VR  M   G++K  G SW+
Sbjct: 430 NTYACCDRWNDANDVRVAMRSRGLKKMAGRSWI 462