BLASTX nr result
ID: Coptis21_contig00039357
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039357 (327 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI15981.3| unnamed protein product [Vitis vinifera] 72 3e-25 ref|XP_002525621.1| cdc6, putative [Ricinus communis] gi|2235350... 75 6e-22 ref|XP_003632136.1| PREDICTED: cell division control protein 6 h... 72 8e-22 ref|XP_004143214.1| PREDICTED: cell division control protein 6 h... 73 3e-20 ref|XP_002299817.1| predicted protein [Populus trichocarpa] gi|2... 73 2e-19 >emb|CBI15981.3| unnamed protein product [Vitis vinifera] Length = 509 Score = 72.0 bits (175), Expect(2) = 3e-25 Identities = 34/47 (72%), Positives = 39/47 (82%) Frame = -2 Query: 326 MKALPFDVFHPQALELCARKVAAASGDMRKALCVCRSAIEMVRGRIK 186 + ALPF VF PQALELCARKVAAASGDMRKAL VCRS +E+V ++ Sbjct: 307 LMALPFPVFQPQALELCARKVAAASGDMRKALSVCRSVLEIVEAELR 353 Score = 68.2 bits (165), Expect(2) = 3e-25 Identities = 38/66 (57%), Positives = 48/66 (72%) Frame = -3 Query: 199 EAELRDSSSTMNLSQPENASSDLFKASLTDCLLKQETNIVRVDHMALALSRTFKSTIVDT 20 EAELR+S +++++S + A +L D L QE NIVRVDHMA ALS+TF+S IVDT Sbjct: 349 EAELRESVNSLSVSSEKGAFDQQTLPAL-DSLTNQEINIVRVDHMATALSKTFRSPIVDT 407 Query: 19 IQSLPQ 2 IQSLPQ Sbjct: 408 IQSLPQ 413 >ref|XP_002525621.1| cdc6, putative [Ricinus communis] gi|223535057|gb|EEF36739.1| cdc6, putative [Ricinus communis] Length = 523 Score = 75.5 bits (184), Expect(2) = 6e-22 Identities = 34/47 (72%), Positives = 41/47 (87%) Frame = -2 Query: 326 MKALPFDVFHPQALELCARKVAAASGDMRKALCVCRSAIEMVRGRIK 186 + AL + +FHPQALELCARKVAAASGDMRKALCVCRSA+E++ +K Sbjct: 303 LMALSWTIFHPQALELCARKVAAASGDMRKALCVCRSAVEILEAELK 349 Score = 53.5 bits (127), Expect(2) = 6e-22 Identities = 30/66 (45%), Positives = 40/66 (60%) Frame = -3 Query: 199 EAELRDSSSTMNLSQPENASSDLFKASLTDCLLKQETNIVRVDHMALALSRTFKSTIVDT 20 EAEL++S+S MN + E D IVR+DHMA+ALS+ ++S +VDT Sbjct: 345 EAELKESTSNMNSFELEKELPD--------------QQIVRIDHMAVALSKAYRSPVVDT 390 Query: 19 IQSLPQ 2 IQSLPQ Sbjct: 391 IQSLPQ 396 >ref|XP_003632136.1| PREDICTED: cell division control protein 6 homolog [Vitis vinifera] Length = 497 Score = 72.0 bits (175), Expect(2) = 8e-22 Identities = 34/47 (72%), Positives = 39/47 (82%) Frame = -2 Query: 326 MKALPFDVFHPQALELCARKVAAASGDMRKALCVCRSAIEMVRGRIK 186 + ALPF VF PQALELCARKVAAASGDMRKAL VCRS +E+V ++ Sbjct: 307 LMALPFPVFQPQALELCARKVAAASGDMRKALSVCRSVLEIVEAELR 353 Score = 56.6 bits (135), Expect(2) = 8e-22 Identities = 33/66 (50%), Positives = 43/66 (65%) Frame = -3 Query: 199 EAELRDSSSTMNLSQPENASSDLFKASLTDCLLKQETNIVRVDHMALALSRTFKSTIVDT 20 EAELR+S +++++S + A Q+T VRVDHMA ALS+TF+S IVDT Sbjct: 349 EAELRESVNSLSVSSEKGA-------------FDQQTLPVRVDHMATALSKTFRSPIVDT 395 Query: 19 IQSLPQ 2 IQSLPQ Sbjct: 396 IQSLPQ 401 >ref|XP_004143214.1| PREDICTED: cell division control protein 6 homolog [Cucumis sativus] gi|449520665|ref|XP_004167354.1| PREDICTED: cell division control protein 6 homolog [Cucumis sativus] Length = 500 Score = 72.8 bits (177), Expect(2) = 3e-20 Identities = 35/44 (79%), Positives = 38/44 (86%) Frame = -2 Query: 317 LPFDVFHPQALELCARKVAAASGDMRKALCVCRSAIEMVRGRIK 186 LPF VFH QALELCARKVAA SGDMRKALCVCR+AIE++ IK Sbjct: 304 LPFVVFHSQALELCARKVAAVSGDMRKALCVCRNAIELLEVEIK 347 Score = 50.4 bits (119), Expect(2) = 3e-20 Identities = 28/66 (42%), Positives = 42/66 (63%) Frame = -3 Query: 199 EAELRDSSSTMNLSQPENASSDLFKASLTDCLLKQETNIVRVDHMALALSRTFKSTIVDT 20 E E++ SS +N + S+ + + + E+ IVR+DHMA+AL++TFKS V+T Sbjct: 343 EVEIKASSKELNHDDACDTSAP------PEPVKRSESQIVRLDHMAVALAKTFKSPAVET 396 Query: 19 IQSLPQ 2 IQSLPQ Sbjct: 397 IQSLPQ 402 >ref|XP_002299817.1| predicted protein [Populus trichocarpa] gi|222847075|gb|EEE84622.1| predicted protein [Populus trichocarpa] Length = 498 Score = 73.2 bits (178), Expect(2) = 2e-19 Identities = 33/45 (73%), Positives = 39/45 (86%) Frame = -2 Query: 320 ALPFDVFHPQALELCARKVAAASGDMRKALCVCRSAIEMVRGRIK 186 A+P VFHP A+ELCARKVAAASGDMRKALCVCRSAIE++ ++ Sbjct: 315 AVPHTVFHPHAMELCARKVAAASGDMRKALCVCRSAIEILEAELR 359 Score = 47.0 bits (110), Expect(2) = 2e-19 Identities = 29/66 (43%), Positives = 38/66 (57%) Frame = -3 Query: 199 EAELRDSSSTMNLSQPENASSDLFKASLTDCLLKQETNIVRVDHMALALSRTFKSTIVDT 20 EAELR+S+S + P + L +VR+DHMA+ALS+ F+S VDT Sbjct: 355 EAELRESTSIL----PSDKELQL--------------QLVRIDHMAVALSKAFRSPTVDT 396 Query: 19 IQSLPQ 2 IQSLPQ Sbjct: 397 IQSLPQ 402