BLASTX nr result

ID: Coptis21_contig00039335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039335
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316197.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
emb|CBI25448.3| unnamed protein product [Vitis vinifera]              162   2e-38
ref|XP_002272996.1| PREDICTED: U-box domain-containing protein 1...   162   2e-38
emb|CAN60363.1| hypothetical protein VITISV_024685 [Vitis vinifera]   162   3e-38
ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38

>ref|XP_002316197.1| predicted protein [Populus trichocarpa] gi|222865237|gb|EEF02368.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  163 bits (412), Expect = 2e-38
 Identities = 76/97 (78%), Positives = 87/97 (89%)
 Frame = -3

Query: 293 NPDNSSLTSQSTTFTIPDEFRCPISLDLMRDPVIVASGHTYDRNSISQWINSGHHSCPKS 114
           N D SS +SQS    IPDEFRCPISLDLM+DPVIVASGHTYDRNSI+QWINSGH +CPKS
Sbjct: 268 NQDVSS-SSQSILSNIPDEFRCPISLDLMKDPVIVASGHTYDRNSIAQWINSGHQTCPKS 326

Query: 113 GQKLIHMALIPNYALKSLIHQWCQENNIPLNEPSSST 3
           GQ+LIHMALIPNYALKS++HQWCQ+NN+PL + SSS+
Sbjct: 327 GQRLIHMALIPNYALKSMVHQWCQDNNVPLIDDSSSS 363


>emb|CBI25448.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/97 (79%), Positives = 87/97 (89%)
 Frame = -3

Query: 293 NPDNSSLTSQSTTFTIPDEFRCPISLDLMRDPVIVASGHTYDRNSISQWINSGHHSCPKS 114
           N D+SS +SQS    IPDEFRCPISLDLMRDPVIVASGHTYDRNSI+QWIN+GH++CPKS
Sbjct: 98  NNDHSS-SSQSAILNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINTGHNTCPKS 156

Query: 113 GQKLIHMALIPNYALKSLIHQWCQENNIPLNEPSSST 3
           G KLIHMALIPNYALKSL+HQWC+ENNI L E +SS+
Sbjct: 157 GMKLIHMALIPNYALKSLVHQWCRENNIQLIESTSSS 193


>ref|XP_002272996.1| PREDICTED: U-box domain-containing protein 13 [Vitis vinifera]
          Length = 688

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/97 (79%), Positives = 87/97 (89%)
 Frame = -3

Query: 293 NPDNSSLTSQSTTFTIPDEFRCPISLDLMRDPVIVASGHTYDRNSISQWINSGHHSCPKS 114
           N D+SS +SQS    IPDEFRCPISLDLMRDPVIVASGHTYDRNSI+QWIN+GH++CPKS
Sbjct: 268 NNDHSS-SSQSAILNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINTGHNTCPKS 326

Query: 113 GQKLIHMALIPNYALKSLIHQWCQENNIPLNEPSSST 3
           G KLIHMALIPNYALKSL+HQWC+ENNI L E +SS+
Sbjct: 327 GMKLIHMALIPNYALKSLVHQWCRENNIQLIESTSSS 363


>emb|CAN60363.1| hypothetical protein VITISV_024685 [Vitis vinifera]
          Length = 668

 Score =  162 bits (409), Expect = 3e-38
 Identities = 76/97 (78%), Positives = 87/97 (89%)
 Frame = -3

Query: 293 NPDNSSLTSQSTTFTIPDEFRCPISLDLMRDPVIVASGHTYDRNSISQWINSGHHSCPKS 114
           N D+SS +SQS    IPDEFRCPISLDLMRDPVIVASGHTYDRNSI+QWI++GH++CPKS
Sbjct: 268 NNDHSS-SSQSAILNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWIBTGHNTCPKS 326

Query: 113 GQKLIHMALIPNYALKSLIHQWCQENNIPLNEPSSST 3
           G KLIHMALIPNYALKSL+HQWC+ENNI L E +SS+
Sbjct: 327 GMKLIHMALIPNYALKSLVHQWCRENNIQLIESTSSS 363


>ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|222851063|gb|EEE88610.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/97 (77%), Positives = 87/97 (89%)
 Frame = -3

Query: 293 NPDNSSLTSQSTTFTIPDEFRCPISLDLMRDPVIVASGHTYDRNSISQWINSGHHSCPKS 114
           N D SS +SQS    IPDEFRCPISLDLM+DPVIVASGHTYDRNSI+QWINSGHH+CPKS
Sbjct: 268 NQDVSS-SSQSILPNIPDEFRCPISLDLMKDPVIVASGHTYDRNSIAQWINSGHHTCPKS 326

Query: 113 GQKLIHMALIPNYALKSLIHQWCQENNIPLNEPSSST 3
           G++LIH +LIPNYALKSL+HQWCQ+NN+PL E S+S+
Sbjct: 327 GKRLIHTSLIPNYALKSLVHQWCQDNNVPLIENSTSS 363


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