BLASTX nr result

ID: Coptis21_contig00039332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039332
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262646.1| PREDICTED: uncharacterized protein LOC100242...   136   2e-30
ref|XP_002315348.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|XP_003536299.1| PREDICTED: uncharacterized protein LOC100789...   130   1e-28
ref|XP_003555466.1| PREDICTED: uncharacterized protein LOC100790...   128   4e-28
ref|XP_004142449.1| PREDICTED: uncharacterized protein LOC101212...   126   2e-27

>ref|XP_002262646.1| PREDICTED: uncharacterized protein LOC100242107 [Vitis vinifera]
           gi|296090371|emb|CBI40190.3| unnamed protein product
           [Vitis vinifera]
          Length = 756

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/84 (77%), Positives = 75/84 (89%), Gaps = 1/84 (1%)
 Frame = -1

Query: 348 AKAGREMVDKYFNCEDVLLNYLYANASSLRTVEYVKPGWVIDMSRFSGVAISGNTKVHYQ 169
           AKAGR++VDKYFNCED+LLNYLYANASS RTVEYV+P WVID S+FSGVAIS NT++HY+
Sbjct: 665 AKAGRKVVDKYFNCEDLLLNYLYANASSSRTVEYVRPTWVIDTSKFSGVAISRNTQLHYR 724

Query: 168 LRSNCLLKFSEMYGTL-DQKWNFS 100
           +RS CLLKFSEMYG L  QKW F+
Sbjct: 725 IRSECLLKFSEMYGGLGKQKWEFN 748


>ref|XP_002315348.1| predicted protein [Populus trichocarpa] gi|222864388|gb|EEF01519.1|
            predicted protein [Populus trichocarpa]
          Length = 847

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/84 (73%), Positives = 76/84 (90%), Gaps = 1/84 (1%)
 Frame = -1

Query: 348  AKAGREMVDKYFNCEDVLLNYLYANASSLRTVEYVKPGWVIDMSRFSGVAISGNTKVHYQ 169
            AKAGRE+VD+YFNCEDVLLNYLYANASS +TVEYV+P WVID S+F+GVAIS NT VHY+
Sbjct: 756  AKAGRELVDRYFNCEDVLLNYLYANASSSQTVEYVRPTWVIDTSKFTGVAISKNTNVHYE 815

Query: 168  LRSNCLLKFSEMYGTL-DQKWNFS 100
            +RSNCLLKFS++YG++  +KW F+
Sbjct: 816  IRSNCLLKFSDIYGSIAGRKWEFN 839


>ref|XP_003536299.1| PREDICTED: uncharacterized protein LOC100789310 [Glycine max]
          Length = 768

 Score =  130 bits (326), Expect = 1e-28
 Identities = 64/87 (73%), Positives = 73/87 (83%), Gaps = 2/87 (2%)
 Frame = -1

Query: 348 AKAGREMVDKYFNCEDVLLNYLYANASSL-RTVEYVKPGWVIDMSRFSGVAISGNTKVHY 172
           A+ GRE+VDK FNCEDVLLNYLYANASS  RTV+YVKP W ID S+FSG AIS NTKVHY
Sbjct: 676 AEKGRELVDKIFNCEDVLLNYLYANASSSSRTVDYVKPAWAIDTSKFSGAAISRNTKVHY 735

Query: 171 QLRSNCLLKFSEMYGTL-DQKWNFSDQ 94
           QLRS+CL+KFSEMYG+L  +KW F  +
Sbjct: 736 QLRSHCLMKFSEMYGSLAGRKWGFDSR 762


>ref|XP_003555466.1| PREDICTED: uncharacterized protein LOC100790409 [Glycine max]
          Length = 761

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 2/87 (2%)
 Frame = -1

Query: 348 AKAGREMVDKYFNCEDVLLNYLYANASSL-RTVEYVKPGWVIDMSRFSGVAISGNTKVHY 172
           A+ GRE+VD+ FNCEDVLLNYLYANASS  RTV+YVKP W ID S+FSG AIS NTKVHY
Sbjct: 669 AEKGRELVDRIFNCEDVLLNYLYANASSSSRTVDYVKPAWAIDTSKFSGAAISRNTKVHY 728

Query: 171 QLRSNCLLKFSEMYGTL-DQKWNFSDQ 94
           QLRS CL+KFSEMYG+L  +KW F  +
Sbjct: 729 QLRSQCLMKFSEMYGSLAGRKWGFDSR 755


>ref|XP_004142449.1| PREDICTED: uncharacterized protein LOC101212638 [Cucumis sativus]
           gi|449513220|ref|XP_004164265.1| PREDICTED:
           uncharacterized LOC101212638 [Cucumis sativus]
          Length = 783

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/83 (72%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
 Frame = -1

Query: 348 AKAGREMVDKYFNCEDVLLNYLYANASSLRTVEYVKPGWVIDMSRFSGVAISGNTKVHYQ 169
           AK GR++VDK FNCEDVLLN+LYANASS +TVEYV+P W ID S+FSG AIS NT+VHYQ
Sbjct: 692 AKPGRDLVDKIFNCEDVLLNFLYANASSTQTVEYVRPAWAIDTSKFSGAAISKNTQVHYQ 751

Query: 168 LRSNCLLKFSEMYGTL-DQKWNF 103
           LRS CL KFSE+Y  L D+KW F
Sbjct: 752 LRSECLNKFSELYAKLGDRKWGF 774


Top