BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039326
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_002306508.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]    93   3e-17
emb|CBI29169.3| unnamed protein product [Vitis vinifera]               92   3e-17

>ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Vitis vinifera]
          Length = 571

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/72 (56%), Positives = 51/72 (70%)
 Frame = -3

Query: 236 ASPQVSPKPSNDLTHQTVKETITTYTNDWKRAYEFFTWVETQVNFKHNVETCNKMIDVLG 57
           ++P +SP  S    H TV++T++ Y NDWKRA EFF WV+TQ  F H  +T N MID+LG
Sbjct: 165 SNPIISPN-STSFDHSTVRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILG 223

Query: 56  KFFEFDLAWELI 21
           KFFEFDL W LI
Sbjct: 224 KFFEFDLIWVLI 235


>ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Vitis vinifera]
          Length = 390

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/72 (56%), Positives = 51/72 (70%)
 Frame = -3

Query: 236 ASPQVSPKPSNDLTHQTVKETITTYTNDWKRAYEFFTWVETQVNFKHNVETCNKMIDVLG 57
           ++P +SP  S    H TV++T++ Y NDWKRA EFF WV+TQ  F H  +T N MID+LG
Sbjct: 41  SNPIISPN-STSFDHSTVRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILG 99

Query: 56  KFFEFDLAWELI 21
           KFFEFDL W LI
Sbjct: 100 KFFEFDLIWVLI 111


>ref|XP_002306508.1| predicted protein [Populus trichocarpa] gi|222855957|gb|EEE93504.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/80 (52%), Positives = 56/80 (70%)
 Frame = -3

Query: 260 YNFQTWTKASPQVSPKPSNDLTHQTVKETITTYTNDWKRAYEFFTWVETQVNFKHNVETC 81
           ++F + T   PQ  P    +L   TV +T++ Y NDWKRA +FF WVET+  F+H  ET 
Sbjct: 27  FHFHSRTPNPPQSDPL---NLDSSTVFQTLSCYNNDWKRALDFFNWVETESQFQHTTETY 83

Query: 80  NKMIDVLGKFFEFDLAWELI 21
           N+MID+LGKFFEFDL+W+LI
Sbjct: 84  NRMIDILGKFFEFDLSWDLI 103


>emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]
          Length = 655

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/72 (56%), Positives = 51/72 (70%)
 Frame = -3

Query: 236 ASPQVSPKPSNDLTHQTVKETITTYTNDWKRAYEFFTWVETQVNFKHNVETCNKMIDVLG 57
           ++P +SP  S    H TV++T++ Y NDWKRA EFF WV+TQ  F H  +T N MID+LG
Sbjct: 276 SNPIISPN-STSFDHSTVRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILG 334

Query: 56  KFFEFDLAWELI 21
           KFFEFDL W LI
Sbjct: 335 KFFEFDLIWVLI 346


>emb|CBI29169.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 40/70 (57%), Positives = 50/70 (71%)
 Frame = -3

Query: 236 ASPQVSPKPSNDLTHQTVKETITTYTNDWKRAYEFFTWVETQVNFKHNVETCNKMIDVLG 57
           ++P +SP  S    H TV++T++ Y NDWKRA EFF WV+TQ  F H  +T N MID+LG
Sbjct: 41  SNPIISPN-STSFDHSTVRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILG 99

Query: 56  KFFEFDLAWE 27
           KFFEFDL WE
Sbjct: 100 KFFEFDLIWE 109