BLASTX nr result

ID: Coptis21_contig00039322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039322
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ96383.1| hypothetical protein [Prunus persica]                   87   2e-15
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               86   2e-15
ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846...    80   2e-13
emb|CAN64170.1| hypothetical protein VITISV_029600 [Vitis vinifera]    80   2e-13
emb|CCH50966.1| T4.5 [Malus x robusta]                                 79   3e-13

>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 38/71 (53%), Positives = 55/71 (77%)
 Frame = +2

Query: 2   GALALAANPVFHARTKHIEVDYHYTRELITSGALQLKYICTQDQLADIFTKGLSSLRFHL 181
           GA  L+ANP+FHARTKH+E+DYH+ R+ +++G L +++I T+DQLADI TK LSS RF  
Sbjct: 122 GATYLSANPIFHARTKHVEIDYHFVRDQVSAGKLSVQFISTKDQLADIMTKPLSSPRFTF 181

Query: 182 LKSKLSIATQS 214
           ++ KL +  +S
Sbjct: 182 IRDKLRVHERS 192


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/66 (59%), Positives = 50/66 (75%)
 Frame = +2

Query: 5    ALALAANPVFHARTKHIEVDYHYTRELITSGALQLKYICTQDQLADIFTKGLSSLRFHLL 184
            +++LA+NPVFH+RTKHIEVDYHY R+ +    L + Y+ T DQ ADIFTKGLS+ RF  L
Sbjct: 1300 SISLASNPVFHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLSTQRFQFL 1359

Query: 185  KSKLSI 202
             SKL +
Sbjct: 1360 ASKLPV 1365


>ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846463 [Brachypodium
            distachyon]
          Length = 989

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/67 (53%), Positives = 48/67 (71%)
 Frame = +2

Query: 2    GALALAANPVFHARTKHIEVDYHYTRELITSGALQLKYICTQDQLADIFTKGLSSLRFHL 181
            GA  L+ANPVFHARTKHIE+D+H+ RE +  GAL ++ I T DQLAD+FTK  + L  H 
Sbjct: 917  GATYLSANPVFHARTKHIEIDFHFVREKVALGALDVRSISTADQLADVFTKPATQLTLHR 976

Query: 182  LKSKLSI 202
              + L++
Sbjct: 977  FSTNLNL 983


>emb|CAN64170.1| hypothetical protein VITISV_029600 [Vitis vinifera]
          Length = 328

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/68 (57%), Positives = 51/68 (75%)
 Frame = +2

Query: 2   GALALAANPVFHARTKHIEVDYHYTRELITSGALQLKYICTQDQLADIFTKGLSSLRFHL 181
           GA ALAANPVFH+RTKHIEVD HY +E +    L + Y+ + +Q+AD+FTK LS  RFH 
Sbjct: 217 GAGALAANPVFHSRTKHIEVDVHYVQEQVLDKKLVVSYVPSVEQVADLFTKPLSIPRFHY 276

Query: 182 LKSKLSIA 205
           L +KL++A
Sbjct: 277 LLTKLNLA 284


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/77 (49%), Positives = 56/77 (72%)
 Frame = +2

Query: 8    LALAANPVFHARTKHIEVDYHYTRELITSGALQLKYICTQDQLADIFTKGLSSLRFHLLK 187
            +ALA NPVFHARTKH+E+DYHY RE +  G + ++++ +  Q+ADIFTK L++ RF  L 
Sbjct: 1584 IALAFNPVFHARTKHVEIDYHYIREKVLLGHIGVQHVASLLQIADIFTKPLAADRFAALT 1643

Query: 188  SKLSIATQSKA*GGVIE 238
            SKLS+ + S +  G ++
Sbjct: 1644 SKLSVRSPSFSLRGCVK 1660


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