BLASTX nr result
ID: Coptis21_contig00039320
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039320 (322 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527885.1| RNA binding protein, putative [Ricinus commu... 110 9e-23 ref|XP_004149107.1| PREDICTED: uncharacterized protein LOC101219... 110 2e-22 ref|XP_004170110.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 108 5e-22 ref|XP_002306252.1| predicted protein [Populus trichocarpa] gi|2... 108 6e-22 ref|XP_003550888.1| PREDICTED: uncharacterized protein LOC100784... 105 4e-21 >ref|XP_002527885.1| RNA binding protein, putative [Ricinus communis] gi|223532736|gb|EEF34516.1| RNA binding protein, putative [Ricinus communis] Length = 715 Score = 110 bits (276), Expect = 9e-23 Identities = 46/81 (56%), Positives = 60/81 (74%) Frame = +2 Query: 68 SKFSKINHSCPQHFITSSAPAPKVYSLHAMERQRYPGWKTGFLTAIHPSFNKRKIGLCNK 247 ++ ++ C + SA AP +Y+LH MERQ++PGWKTGF T IHPS N+R+IGLCNK Sbjct: 635 ARMVSLSRPCNCFVMGCSAAAPSIYTLHVMERQKFPGWKTGFSTCIHPSLNRRRIGLCNK 694 Query: 248 HVKDLYMGQISLQSVDFSAWK 310 H+KD Y G ISLQS+DF +WK Sbjct: 695 HLKDFYFGHISLQSIDFGSWK 715 >ref|XP_004149107.1| PREDICTED: uncharacterized protein LOC101219030 [Cucumis sativus] Length = 711 Score = 110 bits (274), Expect = 2e-22 Identities = 48/82 (58%), Positives = 61/82 (74%) Frame = +2 Query: 65 FSKFSKINHSCPQHFITSSAPAPKVYSLHAMERQRYPGWKTGFLTAIHPSFNKRKIGLCN 244 F++ + C I APAP VY+LH MERQ++PGWKTGF ++IHPS NKR+ GLC Sbjct: 630 FARMVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCK 689 Query: 245 KHVKDLYMGQISLQSVDFSAWK 310 +H+ DLY+G+ISLQSVDF AWK Sbjct: 690 QHLADLYLGRISLQSVDFGAWK 711 >ref|XP_004170110.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228745 [Cucumis sativus] Length = 711 Score = 108 bits (270), Expect = 5e-22 Identities = 47/72 (65%), Positives = 57/72 (79%) Frame = +2 Query: 95 CPQHFITSSAPAPKVYSLHAMERQRYPGWKTGFLTAIHPSFNKRKIGLCNKHVKDLYMGQ 274 C I APAP VY+LH MERQ++PGWKTGF ++IHPS NKR+ GLC +H+ DLY+G+ Sbjct: 640 CNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHLADLYLGR 699 Query: 275 ISLQSVDFSAWK 310 ISLQSVDF AWK Sbjct: 700 ISLQSVDFGAWK 711 >ref|XP_002306252.1| predicted protein [Populus trichocarpa] gi|222855701|gb|EEE93248.1| predicted protein [Populus trichocarpa] Length = 738 Score = 108 bits (269), Expect = 6e-22 Identities = 45/63 (71%), Positives = 55/63 (87%) Frame = +2 Query: 122 APAPKVYSLHAMERQRYPGWKTGFLTAIHPSFNKRKIGLCNKHVKDLYMGQISLQSVDFS 301 A AP VY++H MERQ++PGWKTGF T IHPS NKR+IGLC +H+ DLY+GQISLQS+DFS Sbjct: 676 AAAPSVYTIHVMERQKFPGWKTGFSTCIHPSLNKRRIGLCKQHLTDLYVGQISLQSIDFS 735 Query: 302 AWK 310 +WK Sbjct: 736 SWK 738 >ref|XP_003550888.1| PREDICTED: uncharacterized protein LOC100784683 [Glycine max] Length = 739 Score = 105 bits (262), Expect = 4e-21 Identities = 45/72 (62%), Positives = 56/72 (77%) Frame = +2 Query: 95 CPQHFITSSAPAPKVYSLHAMERQRYPGWKTGFLTAIHPSFNKRKIGLCNKHVKDLYMGQ 274 C I S+ AP+VY+LH MERQ+ P WKTGF T IHPS NKR++GLC +H++DLY+G Sbjct: 667 CNCFVIGCSSSAPRVYTLHVMERQKSPSWKTGFSTCIHPSLNKRRVGLCKQHLRDLYLGH 726 Query: 275 ISLQSVDFSAWK 310 ISLQS+DF AWK Sbjct: 727 ISLQSIDFRAWK 738